Gene SeHA_C0499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0499 
SymbolbrnQ 
ID6489704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp500393 
End bp501712 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content57% 
IMG OID642740766 
Productbranched-chain amino acid transport system II carrier protein 
Protein accessionYP_002044433 
Protein GI194447871 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1114] Branched-chain amino acid permeases 
TIGRFAM ID[TIGR00796] branched-chain amino acid uptake carrier 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATC AGTTAAAATC GCGCGATATC ATCGCCCTGG GCTTTATGAC ATTTGCGCTG 
TTCGTTGGCG CAGGCAATAT TATCTTTCCT CCTATGGTCG GTTTGCAGGC GGGTGAACAC
GTCTGGACAG CCGCTATTGG CTTTCTGATT ACCGCCGTAG GGCTACCGGT TCTTACTGTT
GTGGCGCTGG CGAAAGTCGG CGGCGGCGTA GACAGCCTCA GTACGCCGAT TGGTAAAGTG
GCGGGACTCC TGCTGGCGAC CGTTTGCTAT CTGGCCGTCG GGCCGTTATT TGCGACGCCG
CGTACCGCGA CGGTGTCGTT TGAGGTCGGT ATCGCTCCGT TGACCGGCGA TTCTGCAATG
CCGTTGCTGA TTTACAGCGT GGTCTATTTC GCTATCGTTA TTCTGGTTTC CCTCTATCCG
GGTAAGCTGC TGGATACGGT AGGGAATTTC CTGGCGCCGT TGAAAATTAT TGCGCTGGTC
ATCCTTTCCG TCGCGGCTAT CGTTTGGCCT GCCGGTCCAA TCAGCAACGC CCTGGACGCT
TATCAGAATG CGGCCTTTTC TAACGGATTT GTGAACGGCT ATCTGACGAT GGATACGCTG
GGCGCGATGG TGTTTGGTAT CGTTATTGTG AACGCGGCGC GTTCTCGCGG CGTGACCGAA
GCGCGCCTGT TGACGCGTTA CACGGTCTGG GCCGGCCTGA TGGCGGGCGT GGGGCTGACG
CTGCTTTACC TTGCCTTGTT CCGCTTAGGT TCTGACAGCG CGACGCTGGT CGATCAGTCA
GCGAACGGCG CGGCGATTCT TCATGCCTAC GTTCAGCATA CCTTTGGCGG CGCGGGAAGC
TTCCTGCTGG CGGCGCTGAT CTTTATCGCG TGTCTGGTGA CGGCGGTGGG GCTGACCTGC
GCCTGCGCTG AGTTTTTCGC GCAGTATATT CCGCTGTCTT ACCGCACGCT GGTCTTTATT
CTCGGCGGCT TCTCTATGGT GGTGTCAAAC CTCGGACTGA GCCATCTGAT TCAAATCTCC
ATTCCGGTGC TGACGGCTAT CTATCCGCCG TGTATCGCAC TGGTTGTATT AAGTTTTACC
CGCTCATGGT GGCATAATTC CACCCGTATC ATCGCGCCGG CCATGTTTAT CAGTCTGCTT
TTTGGTATCC TTGACGGCAT CAAAGCATCT GCCTTTGGCG ATATGCTGCC AGCCTGGAGT
CAGCGTTTGC CGCTGGCGGA ACAGGGACTG GCGTGGTTGA TGCCAACGGT GGTGATGGTG
ATCCTGGCGA TTATCTGGGA TCGCGCGGCG GGTCGGCAGG TGACCTCCAG CGCTCACTAA
 
Protein sequence
MTHQLKSRDI IALGFMTFAL FVGAGNIIFP PMVGLQAGEH VWTAAIGFLI TAVGLPVLTV 
VALAKVGGGV DSLSTPIGKV AGLLLATVCY LAVGPLFATP RTATVSFEVG IAPLTGDSAM
PLLIYSVVYF AIVILVSLYP GKLLDTVGNF LAPLKIIALV ILSVAAIVWP AGPISNALDA
YQNAAFSNGF VNGYLTMDTL GAMVFGIVIV NAARSRGVTE ARLLTRYTVW AGLMAGVGLT
LLYLALFRLG SDSATLVDQS ANGAAILHAY VQHTFGGAGS FLLAALIFIA CLVTAVGLTC
ACAEFFAQYI PLSYRTLVFI LGGFSMVVSN LGLSHLIQIS IPVLTAIYPP CIALVVLSFT
RSWWHNSTRI IAPAMFISLL FGILDGIKAS AFGDMLPAWS QRLPLAEQGL AWLMPTVVMV
ILAIIWDRAA GRQVTSSAH