| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C0452 |
|---|
| Symbol | |
|---|
| ID | 6489290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 450457 |
|---|
| End bp | 452415 |
|---|
| Gene Length | 1959 bp |
|---|
| Protein Length | 652 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642740721 |
|---|
| Product | type III restriction-modification system StyLTI enzyme mod |
|---|
| Protein accession | YP_002044388 |
|---|
| Protein GI | 194451308 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2189] Adenine specific DNA methylase Mod |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 1.31948e-23 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAAG ATAACCAAAA ACACAACGAG TCTGTTGCCC CGAATAGCGT CTTTCTGTCT
GAGTTACAAC GTGCATTACC GGAATTTTTT ACCGCCGATT GCTATAACGA GCAGGGCGAA
CTGATCGCGA AAGGCGGATT TGATCTCGCC AAATTTGAGC GCGCGCTGAA AGCGCGTAAT
ATTGATGAGC TGACTAGCGG TTATCAGATT GATTTTATTG GCAAAGATTA CGCAAAAAAA
CAGGCGGGTG AAAAATCCGT TACCGTTATC GTTCCTGACG TGGAACACAA TACTCTGGCA
GAAAACAAAA ACAGCCATAA TCTTTTTCTG ACCGGGGATA ATCTGGATGT TTTACGCCAT
CTGCAAAATA ATTACGCCGA TACCGTCGAT ATGATCTATA TAGATCCCCC TTATAACACC
GGATCGGACG GGTTTGTTTA TCCCGATCAT TTTGAATATA GCGATCGGGC GTTGCAGGAT
ATGTTTGGTC TTAATGATAC TGAACTGGCA CGTTTAAAAT CCATTCAGGG TAAATCGACG
CACTCCGCGT GGTTATCTTT TATGTATCCG CGTCTTTTCC TGGCCAGGAA GCTCCTGAAA
GATACCGGAT TTATTTTTAT CTCTATCGAC GATAATGAGT ACGCCAATCT TAAATTAATG
ATGGATGAGA TTTTTGGCGA AGGCGGATTT GTCACCAATG TGATGTGGAA GCGCAAAAAA
GAGATTTCTA ACGACTCTGA TAACGTTTCC ATCCAGGGGG AATACATTCT TGTTTATGCC
AAAACCGGTC AGGGCGCTTT ACGTTTAGAA CCGCTTTCTA AAGAGTATAT TCAGAAATCC
TATAAAGAAC CGACCGAACA GTTTCCAGAA GGGAAATGGC GGCCGGTGCC GTTAACGGTG
TCAAAAGGGC TGAGCGGCGG CGGCTATACC TATAAAATTA CCACGCCGAA CGGTACGGTA
CACGAAAGAC TATGGGCTTA TCCTGAAGCC AGTTACCAAA AACTGGTGGC CGATAATCTG
GTCTATTTTG GCAAAGATAA CGGCGGAATT CCCCAGCGAG TCATGTACGC GCATCACAGT
AAAGGGCAGC CAACGACCAA TTACTGGGAT AACGTAGCGT CGAATAAAGA GGGGAAAAAG
GAGATTCTGG ATCTCTTCGG CGACAACGTT TTTGATACGC CGAAACCGAC CGCATTATTG
AAGAAAATCA TCAAGCTCGC TATCGATAAA GACGGCGTCG TTCTGGACTT TTTTGCCGGT
TCCGGCACCA CGGCCCATGC GGTAATGGCG CTGAATGAAG AAGATGGGGG GCAGCGCACG
TTTATTCTGT GCACTATCGA TCAGGCATTA AGCAATAACA CTATCGCGAA AAAAGCAGGT
TATAACACTA TTGATGAAAT CAGCCGCGAG CGAATTACAC GCGTTGCGGC GAAGATCCGC
GCCAACAATC CCGCGACCAA TAGCGATCTC GGTTTTAAAC ATTATCGTTT TGCCACTCCG
ACACAGCAGA CGCTGGACGA TCTGGATAGC TTCGATATTG CTACCGGCCA TTTTATCAAT
ACCAGCGGTC AACTGGCCGC TTTCACCGAG TCAGGATTTA CCGACATGAT CAATCCTTTT
TCCGCCAGAG GATTGGGCGT GCCGGGCGGC GCAAGCGGCG AAGAGACCTT ATTAACGACA
TGGCTGGTCG CCGATGGTTA TAAAATGGAT ATTGACGTAC AGACCATTGA TTTTTCCGGC
TATTGCGCCA GGTATGTTGA TAATACGCGC CTGTATCTGA TTGATGAACG ATGGGGAACA
GAGCAGACCC GCGATCTTCT CAACCACATT GGTACGCACC AGCTTCCGGT TCAGACCATT
GTCATTTACG GCTACTCTTT CGACCTTGAA TCCATTCGTG AACTGGAAAT CGGCTTAAAA
CAGCTTGATC AAAAAGTGAA CCTGGTGAAG CGTTATTAA
|
|---|
| Protein sequence | MLKDNQKHNE SVAPNSVFLS ELQRALPEFF TADCYNEQGE LIAKGGFDLA KFERALKARN
IDELTSGYQI DFIGKDYAKK QAGEKSVTVI VPDVEHNTLA ENKNSHNLFL TGDNLDVLRH
LQNNYADTVD MIYIDPPYNT GSDGFVYPDH FEYSDRALQD MFGLNDTELA RLKSIQGKST
HSAWLSFMYP RLFLARKLLK DTGFIFISID DNEYANLKLM MDEIFGEGGF VTNVMWKRKK
EISNDSDNVS IQGEYILVYA KTGQGALRLE PLSKEYIQKS YKEPTEQFPE GKWRPVPLTV
SKGLSGGGYT YKITTPNGTV HERLWAYPEA SYQKLVADNL VYFGKDNGGI PQRVMYAHHS
KGQPTTNYWD NVASNKEGKK EILDLFGDNV FDTPKPTALL KKIIKLAIDK DGVVLDFFAG
SGTTAHAVMA LNEEDGGQRT FILCTIDQAL SNNTIAKKAG YNTIDEISRE RITRVAAKIR
ANNPATNSDL GFKHYRFATP TQQTLDDLDS FDIATGHFIN TSGQLAAFTE SGFTDMINPF
SARGLGVPGG ASGEETLLTT WLVADGYKMD IDVQTIDFSG YCARYVDNTR LYLIDERWGT
EQTRDLLNHI GTHQLPVQTI VIYGYSFDLE SIRELEIGLK QLDQKVNLVK RY
|
|---|
| |