Gene SeHA_C0394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0394 
Symbol 
ID6492423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp393293 
End bp393796 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content49% 
IMG OID642740668 
Productphage lysozyme 
Protein accessionYP_002044335 
Protein GI194450185 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.684429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00000000000000176346 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCAATGT CACCGGCACT ACGAAATAGC GTAATAGCGG CGATAAGTGG CGGGGCTATT 
GCTATAGCAT CTGTGTTAAT CACTGGCCCC GGTGGTAACG ATGGTCTGGA AGGTGTCAGA 
TACAAACCAT ATAAGGACGT AGTTGGTGTG TTGACTGTGT GTTATGGCCA CACCGGAAAA 
GACATCATGC CTGGTAAAAC GTATACCGAA GCAGAATGCA AAGCCCTCCT GAATAAAGAC 
CTTGCCACGG TCGCCAGACA AATTAACCCG TACATCAAAG TCGATATACC GGAAACAACG 
CGCGGCGCCA TTTACTCGTT CGTCTACAAC GTTGGCGCAG GCAATTTCAG AACATCGACG 
CTTCTTCGCA AAATAAATCA GGTCGATATC AAAGGTGCAT GTGATCAGCT ACGTCGCTGG 
ACATACGCTG GCGGTAAGCA ATGGAAAGGC CTGATGACTC GTCGTGAGAT TGAGCGTGAA 
GTCTGTTTGT GGGGGCAGCA ATGA
 
Protein sequence
MAMSPALRNS VIAAISGGAI AIASVLITGP GGNDGLEGVR YKPYKDVVGV LTVCYGHTGK 
DIMPGKTYTE AECKALLNKD LATVARQINP YIKVDIPETT RGAIYSFVYN VGAGNFRTST 
LLRKINQVDI KGACDQLRRW TYAGGKQWKG LMTRREIERE VCLWGQQ