| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C0329 |
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| Symbol | |
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| ID | 6488987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011083 |
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| Strand | + |
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| Start bp | 338910 |
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| End bp | 341141 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642740606 |
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| Product | Rhs family protein |
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| Protein accession | YP_002044274 |
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| Protein GI | 194450123 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.312709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 0.985789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTG TATCCACAAA TAATAAATCC GGTATAGGAG GGCTGACGAC AACCACGCCG
CCGATAACCG GAGAAAGTGG CGGTGTCACC GCAGATTCAG TCGCCGGAAG CGTGGCAGAT
GCGGCGGAAG CCGCCGTGGA ACAGGCTGCG GGATCGCTGT TTGGCGCATT GCCGGAGCCA
TCAGGACTGG TGAAAGCCGC GGTGGCAGCG GCGCAGGCCG CCGCCGCAGG TATGGCGCAG
GATGCGGTAT CGGCCATCGT CTCCGCTGTT GCAGGCGGGC CGGGGGCGCA TAATGTGACG
GTCAGCGGCA GCGCCGTACC GCCGGGCGCA TTACTGTTCG CCAGCCTGGA CGGCGGCGAA
ACATTAAGTG AACTGTTCAG CTATGTGGTA CAGCTAAAAA CGCCCGACAC CCTGAATCTG
GGCTATGTCT CCCCGGCGGC CAACCTGCCG CTCAAACCGA TGGTGGGCAA AGATCTGTGC
GTCAACATCG AACTGGATGG TGGCGGTAAA CGACATATCA GCGGGCTGGT CACGGCGGCG
CGGGTGGTGG GCCATGAAGG GCGTTCGGTT ACCTATGAGC TACGTATGGA GCCGTGGCTG
AAACTGCTGA CCCATACCAG CGACTACAAA GCATTCCAGA ATAAAAGCGT GGTGGATATT
CTGGATGAAG TGCTGGCGGA ATACCCCTAC CCGGTGGAAA AGCGGCTGGT GGAAAGCTAC
CCGGTACGCA CCTGGCAGGT GCAGTACGGT GAAACTGATT TTGATTTTCT TCAGCGACTG
ATGCAGGAGT GGGGCATCTA TTGGTGGTTT GAGCACAGCG AGGACAGCCA CACGCTGGTG
CTGGCGGATG CCATCAGCGC CCACAAAGCA TGTCCGGACT CGCCGCTGGT CGAGTGGCAC
CAGGAAGGGC TGAAGCTGGA CAAGGAGTTT ATCCACACTA TCACGGCAAA CGAGAGTCTG
CGGACTGGAC AGTGGGTGCT GGATGATTTC GATTTTACGA AGCCACGTTC ATTGCTGGCA
AACACGGTGG CAAACCCGCG TGAAACCGGT CATGCCACCT ACGAGCATTA TGAGTGGCCG
GGAGACTACT TCGACAAGAG TGAAGGCGAG ATGCTGACGC GCATTCGTAT GGAAGCGCAG
CGCAGCCCCG GCAGTCGGGT GCTGGGGGGA GGGAATATCC GCACACTCAT GACCGGTTAT
ACCTTCACGC TGGAAAACTA TCCCACTGCC GAAGTCAATC AGGAATACCT GCTGATGCAG
ACCTTGCTGT TTGTGCAGGA CAACGCGCAG CACAGCGGGC AGGACCAGCA CTTTACCTTT
TCCACCCGTT TTGAACTGCA CCCCACCCGC GAGGTGTTCC GCCCGCAGCG GACGGTGAGC
AAACCCCACA CCAAAGGGCC GCAGAGCGCC ATCGTCACCG GCCCGGCGGG CCAGGAAATC
TGGACGGATC AGTACGGGCG GGTAAAGGTA CAGTTTGGCT GGGATCGCTA CGGCAAAATG
GATGAAAACA GCTCTTGCTG GATACGCGTC AGCTACCCAT GGGCGGGCAA AGGCTTCGGG
ATGATCCAGA TCCCGCGTAT CGGCCAGGAA GTGCTGGTGG ATTTCAAAAA CGGCGATCCG
GATCTGCCGA TCATCGTGGG GCGTACCTAC AACCAGGACA CCATGCCGCC GTGGGGACTG
CCGGGCGCGG CAACACAGAG CGGGATATAC AGCCACACTA TCGGCGGCGG ACCGACCAAT
GCCAACGCCC TGCGTTTTGA AGATAAACCC GGTAGTGAAG AGGTCTGGCT ACATGCTGAA
AAAGATCAGC GTATTGAAGT TAATAATAAT GAAAGTCACT GGGTGGGGAA TAATCGGGTT
AAGGTCATTG ATCAGTCAGA AATAGCCACT ATTGGCGCTG TCCGCGACCA TAAAGTTCAG
TATGACGATA CCTCTCTGGC CGGAGGAAAT AAAACCATTC AGACGGTAAA AGAGTTATAT
CTGGCAGCGG GTGATTCTAT TACTCTGAGT TGTGGTGACA CCGTTCTGTA CATGAGCAGT
AAGGGGGAAT TTTACGTAAC CTGTAAAACG TTCAATATTA CTGCAACAGA TGCCGATGGT
CAGATTAATA CTATAAAAGG GCAGCTGGAT TTAAATATGG ATAAAAGAGA ACCCAAAGTG
GGAACATTTG GTGAGTCAGA AAAAACAGCA ATGGCAGCAG TAATTAAGGA AACTTTCCCA
CCCAAAGAAT AG
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| Protein sequence | MSFVSTNNKS GIGGLTTTTP PITGESGGVT ADSVAGSVAD AAEAAVEQAA GSLFGALPEP
SGLVKAAVAA AQAAAAGMAQ DAVSAIVSAV AGGPGAHNVT VSGSAVPPGA LLFASLDGGE
TLSELFSYVV QLKTPDTLNL GYVSPAANLP LKPMVGKDLC VNIELDGGGK RHISGLVTAA
RVVGHEGRSV TYELRMEPWL KLLTHTSDYK AFQNKSVVDI LDEVLAEYPY PVEKRLVESY
PVRTWQVQYG ETDFDFLQRL MQEWGIYWWF EHSEDSHTLV LADAISAHKA CPDSPLVEWH
QEGLKLDKEF IHTITANESL RTGQWVLDDF DFTKPRSLLA NTVANPRETG HATYEHYEWP
GDYFDKSEGE MLTRIRMEAQ RSPGSRVLGG GNIRTLMTGY TFTLENYPTA EVNQEYLLMQ
TLLFVQDNAQ HSGQDQHFTF STRFELHPTR EVFRPQRTVS KPHTKGPQSA IVTGPAGQEI
WTDQYGRVKV QFGWDRYGKM DENSSCWIRV SYPWAGKGFG MIQIPRIGQE VLVDFKNGDP
DLPIIVGRTY NQDTMPPWGL PGAATQSGIY SHTIGGGPTN ANALRFEDKP GSEEVWLHAE
KDQRIEVNNN ESHWVGNNRV KVIDQSEIAT IGAVRDHKVQ YDDTSLAGGN KTIQTVKELY
LAAGDSITLS CGDTVLYMSS KGEFYVTCKT FNITATDADG QINTIKGQLD LNMDKREPKV
GTFGESEKTA MAAVIKETFP PKE
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