Gene SeHA_C0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0187 
SymbolpdxA 
ID6488733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp192829 
End bp193812 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content55% 
IMG OID642740466 
Product4-hydroxythreonine-4-phosphate dehydrogenase 2 
Protein accessionYP_002044140 
Protein GI194449534 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1995] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.256011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones99 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGACTA AAACCGTTGC CATTACCATG GGCGATCCAG CGGGCATTGG GCCGGAAATT 
ATTGTTAAAG CGCTAAGCGA AGACGGTCTC AACGGCGCGC CGCTGGTGGT TATTGGATGC
CTCGCAACGT TGAAACGTTT ACAGGCGAAG GGCATCACGC CGAACGTCGA GTTACGGGCC
ATTGAACGGG TCGCCGAAGC GCGTTTTGCG CCCGGCATCA TTCATGTGAT TGATGAGCCG
CTGGCGCAGC CGGAGGCGCT GGAGGCCGGG AAAGTTCAGG CGCAGGCGGG GGATTTAGCG
TATCGCTGCG TGAAGCGCGC CACCGAGTTA GCGTTACGGG GCGACGTACA GGCTATCGCT
ACCGCGCCGC TGAATAAAGA GGCGCTGCAC CTGGCGGGGC ACAACTATCC GGGCCATACC
GAGCTGCTCG CGACCCTGAC CCATAGCCGC GATTACGCGA TGGTACTTTA CACCGATAAA
CTAAAAGTGA TTCACGTTTC AACGCATATC GCGCTGCGTA AATTCCTTGA TACGTTAAGT
ACCACGCGTG TCGAAACGGT GATTGGTATT GCTGATACTT TCCTCAAGCG TGTGGGTTAC
GTTAAACCGC GTATCGCCGT GGCAGGCGTG AATCCTCATG CGGGCGAGAA TGGCCTGTTT
GGCGATGAAG AGACGCGTAT CCTGACGCCA GCCATTACCG ATGCCCGCGC AAAAGGTATG
GACGTTTATG GGCCGTGCCC GCCGGATACT GTATTTCTCC AGGCTTATGA GGGACAGTAT
GATATGGTGG TGGCGATGTA TCATGATCAG GGGCATATCC CGTTGAAATT GCTTGGCTTT
TATGATGGCG TGAATATCAC CGCGGGGCTG CCGTTTATTC GGACCTCTGC CGATCATGGC
ACCGCATTTG ATATCGCCTG GACGGGAAAA GCAAAATCTG AGAGCATGGC CGTATCGATC
AAACTGGCAA TGCAACTGGC ATAA
 
Protein sequence
METKTVAITM GDPAGIGPEI IVKALSEDGL NGAPLVVIGC LATLKRLQAK GITPNVELRA 
IERVAEARFA PGIIHVIDEP LAQPEALEAG KVQAQAGDLA YRCVKRATEL ALRGDVQAIA
TAPLNKEALH LAGHNYPGHT ELLATLTHSR DYAMVLYTDK LKVIHVSTHI ALRKFLDTLS
TTRVETVIGI ADTFLKRVGY VKPRIAVAGV NPHAGENGLF GDEETRILTP AITDARAKGM
DVYGPCPPDT VFLQAYEGQY DMVVAMYHDQ GHIPLKLLGF YDGVNITAGL PFIRTSADHG
TAFDIAWTGK AKSESMAVSI KLAMQLA