Gene SeHA_C0110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0110 
Symbol 
ID6489794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp116839 
End bp117684 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content54% 
IMG OID642740398 
ProductDNA-binding transcriptional regulator AraC 
Protein accessionYP_002044072 
Protein GI194451591 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.234129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA CGCAAAATGA TCCGCTATTG CCGGGATATT CATTTAATGC CCATCTGGTC 
GCCGGGCTGA CGCCAATTGA AGCGAATGGA TATCTGGATT TTTTTATCGA TCGTCCGTTG
GGCATGAAGG GATATATTCT TAACCTGACC ATCCGCGGAG AGGGCGTCAT TAATAATAAT
GGCGAGCAGT TTGTCTGTCG GCCTGGCGAT ATATTATTGT TTCCGCCGGG CGAGATTCAT
CACTATGGAC GGCATCCGGA CGCCAGCGAG TGGTATCACC AGTGGGTTTA TTTCCGGCCT
CGCGCCTACT GGCAGGAGTG GCTGACCTGG CCGACAATCT TTGCCCAGAC AGGATTTTTC
CGCCCGGACG AGGCGCGCCA GCCGCATTTC AGCGAACTGT TCGGGCAGAT CATCAGCGCC
GGGCAAGGGG AAGGTCGCTA TTCTGAGCTA CTGGCGATCA ATCTGCTGGA GCAGTTGTTG
CTCAGACGTA TGGCGGTAAT TAATGAGTCG TTGCACCCGC CGATGGATAG CCGTGTGCGC
GATGCCTGCC AGTATATCAG CGACCATCTG GCGGACAGCC ATTTTGATAT CGCCAGCGTC
GCCCAGCATG TCTGCCTGTC GCCCTCCCGG TTATCACATC TGTTCCGCCA GCAGTTAGGC
ATTAGCGTAT TGAGCTGGCG CGAAGATCAG CGTATCAGCC AGGCGAAACT TCTGCTTAGC
ACTACGCGAA TGCCGATAGC GACCGTTGGG CGCAATGTTG GATTTGACGA TCAGCTCTAT
TTTTCGCGGG TATTTAAAAA ATGCACCGGG GCAAGTCCTA GCGAGTTCAG GGCCGGATGT
GAATAA
 
Protein sequence
MAETQNDPLL PGYSFNAHLV AGLTPIEANG YLDFFIDRPL GMKGYILNLT IRGEGVINNN 
GEQFVCRPGD ILLFPPGEIH HYGRHPDASE WYHQWVYFRP RAYWQEWLTW PTIFAQTGFF
RPDEARQPHF SELFGQIISA GQGEGRYSEL LAINLLEQLL LRRMAVINES LHPPMDSRVR
DACQYISDHL ADSHFDIASV AQHVCLSPSR LSHLFRQQLG ISVLSWREDQ RISQAKLLLS
TTRMPIATVG RNVGFDDQLY FSRVFKKCTG ASPSEFRAGC E