Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0109 |
Symbol | araB |
ID | 6490270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 114789 |
End bp | 116498 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642740397 |
Product | ribulokinase |
Protein accession | YP_002044071 |
Protein GI | 194449795 |
COG category | [C] Energy production and conversion |
COG ID | [COG1069] Ribulose kinase |
TIGRFAM ID | [TIGR01234] L-ribulokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 0.526121 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATTG CAATTGGCCT CGATTTTGGC AGTGATTCAG TGCGCGCTCT GGCAGTGGAC TGCGCCACCG GCGACGAGAT CGCCACCAGC ATAGAGTGGT ATCCGCGCTG GCAAGAAGGC CGTTATTGCG ACGGCCCGAA CAACCAGTTC CGTCATCATC CGCGCGACTA CATGGAGTCA ATGGAGGCCG CGCTGAAAGC CGTTCTGGCA CAATTAAGCG CCGCGCAACG CGCAAATGTC GTTGGCATTG GCGTTGACAG CACCGGCTCT ACGCCAGCGC CGATTGACGC CGACGGTAAC GTCCTGGCGC TGCGTCCAGA GTTCGCCGAG AACCCGAATG CGATGTTTGT GCTGTGGAAA GATCACACCG CCGTGGAAGA GGCCGACGAA ATCACTCGTC TGTGCCATAA GCCAGGCAAG GTCGACTACT CCCGCTATAT TGGCGGCATT TACTCCAGCG AATGGTTCTG GGCGAAGATT CTGCACGTCA CCCGGCAGGA TAGCGCCGTC GCGCAGGCCG CCGTCTCGTG GATTGAGCTG TGCGACTGGG TGCCGGCGCT GCTTTCCGGC ACCACTCGCC CGCAGGATAT CCGCCGTGGC CGCTGCAGCG CCGGGCACAA AACGCTGTGG CATGAAAGCT GGGGCGGTCT GCCGCCCGCG AGCTTCTTTG ATGAACTCGA TCCGTGCATT AACCGTCATC TGCGCTACCC GTTATTTAGC GAAACCTTCA CCGCCGATCT GCCCGTGGGC ACCCTGTGCG CCGAATGGGC GCAGCGCCTC GACTTGCCGG AAAGCGTAGT GATTTCCGGC GGCGCGTTCG ACTGTCACAT GGGCGCGGTC GGCGCGGGCG CACAGCCCAA TACGCTGGTG AAAGTCATCG GCACGTCTAC CTGCGACATT CTGATTGCGG ATAAACAGAG CGTCGGGGAT CGCGCCGTGA AAGGCATTTG CGGTCAGGTT GACGGCAGCG TGGTGCCGAA CTTTATCGGT CTGGAAGCGG GGCAATCTGC TTTCGGCGAT ATCTACGCCT GGTTTAGCCG CGTGTTGAGC TGGCCGCTGG AGCAACTTGC CGCGCAGCAC CCGGAACTGA AACCCCAGAT TAACGCCAGC CAGAAGCAGC TACTGCCAGC GCTCACCGAC GCCTGGGCGA AAAATCCGTC CCTGGATCAC CTGCCGGTGG TGCTCGACTG GTTTAACGGT CGCCGCACGC CAAACGCTAA TCAGCGTCTG AAAGGCGTCA TTACCGATCT CAATCTCGCC ACCGACGCGC CAGCGCTGTT TGGCGGTCTG GTCGCTTCGA CCGCCTTCGG CGCGCGCGCC ATTCAGGAGT GTTTTACCGA TCAGGGTATC GCGGTCAATA ACGTGATGGC GCTTGGCGGC ATCGCCCGTA AAAATCAGGT CATTATGCAG GTCTGCTGCG ACGTACTGAA TCGTCCGTTG CAGATCGTCG CTTCCGACCA GTGTTGCGCA TTAGGCGCCG CTATCTTTGC CGCCGTCGCT GCGAAAGTCC ATGCCGACAT TCCAGCCGCC CAGCAAAGCA TGGCGAGCGC GGTAGAACGC ACTCTGCGCC CCCACCCTGA ACAGGCGCAA CGCTTCGAAC AGCTTTACCG CCGCTACCAG CAGTGGGCGC TAAGCGCAGA ACAACATTAT CTTCCGACTG CCGCGCCGGC GCCAACGACC CCGGCCAATC AGGCAATCCT GACTCATTAA
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Protein sequence | MAIAIGLDFG SDSVRALAVD CATGDEIATS IEWYPRWQEG RYCDGPNNQF RHHPRDYMES MEAALKAVLA QLSAAQRANV VGIGVDSTGS TPAPIDADGN VLALRPEFAE NPNAMFVLWK DHTAVEEADE ITRLCHKPGK VDYSRYIGGI YSSEWFWAKI LHVTRQDSAV AQAAVSWIEL CDWVPALLSG TTRPQDIRRG RCSAGHKTLW HESWGGLPPA SFFDELDPCI NRHLRYPLFS ETFTADLPVG TLCAEWAQRL DLPESVVISG GAFDCHMGAV GAGAQPNTLV KVIGTSTCDI LIADKQSVGD RAVKGICGQV DGSVVPNFIG LEAGQSAFGD IYAWFSRVLS WPLEQLAAQH PELKPQINAS QKQLLPALTD AWAKNPSLDH LPVVLDWFNG RRTPNANQRL KGVITDLNLA TDAPALFGGL VASTAFGARA IQECFTDQGI AVNNVMALGG IARKNQVIMQ VCCDVLNRPL QIVASDQCCA LGAAIFAAVA AKVHADIPAA QQSMASAVER TLRPHPEQAQ RFEQLYRRYQ QWALSAEQHY LPTAAPAPTT PANQAILTH
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