Gene SeHA_C0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0109 
SymbolaraB 
ID6490270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp114789 
End bp116498 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content61% 
IMG OID642740397 
Productribulokinase 
Protein accessionYP_002044071 
Protein GI194449795 
COG category[C] Energy production and conversion 
COG ID[COG1069] Ribulose kinase 
TIGRFAM ID[TIGR01234] L-ribulokinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.526121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTG CAATTGGCCT CGATTTTGGC AGTGATTCAG TGCGCGCTCT GGCAGTGGAC 
TGCGCCACCG GCGACGAGAT CGCCACCAGC ATAGAGTGGT ATCCGCGCTG GCAAGAAGGC
CGTTATTGCG ACGGCCCGAA CAACCAGTTC CGTCATCATC CGCGCGACTA CATGGAGTCA
ATGGAGGCCG CGCTGAAAGC CGTTCTGGCA CAATTAAGCG CCGCGCAACG CGCAAATGTC
GTTGGCATTG GCGTTGACAG CACCGGCTCT ACGCCAGCGC CGATTGACGC CGACGGTAAC
GTCCTGGCGC TGCGTCCAGA GTTCGCCGAG AACCCGAATG CGATGTTTGT GCTGTGGAAA
GATCACACCG CCGTGGAAGA GGCCGACGAA ATCACTCGTC TGTGCCATAA GCCAGGCAAG
GTCGACTACT CCCGCTATAT TGGCGGCATT TACTCCAGCG AATGGTTCTG GGCGAAGATT
CTGCACGTCA CCCGGCAGGA TAGCGCCGTC GCGCAGGCCG CCGTCTCGTG GATTGAGCTG
TGCGACTGGG TGCCGGCGCT GCTTTCCGGC ACCACTCGCC CGCAGGATAT CCGCCGTGGC
CGCTGCAGCG CCGGGCACAA AACGCTGTGG CATGAAAGCT GGGGCGGTCT GCCGCCCGCG
AGCTTCTTTG ATGAACTCGA TCCGTGCATT AACCGTCATC TGCGCTACCC GTTATTTAGC
GAAACCTTCA CCGCCGATCT GCCCGTGGGC ACCCTGTGCG CCGAATGGGC GCAGCGCCTC
GACTTGCCGG AAAGCGTAGT GATTTCCGGC GGCGCGTTCG ACTGTCACAT GGGCGCGGTC
GGCGCGGGCG CACAGCCCAA TACGCTGGTG AAAGTCATCG GCACGTCTAC CTGCGACATT
CTGATTGCGG ATAAACAGAG CGTCGGGGAT CGCGCCGTGA AAGGCATTTG CGGTCAGGTT
GACGGCAGCG TGGTGCCGAA CTTTATCGGT CTGGAAGCGG GGCAATCTGC TTTCGGCGAT
ATCTACGCCT GGTTTAGCCG CGTGTTGAGC TGGCCGCTGG AGCAACTTGC CGCGCAGCAC
CCGGAACTGA AACCCCAGAT TAACGCCAGC CAGAAGCAGC TACTGCCAGC GCTCACCGAC
GCCTGGGCGA AAAATCCGTC CCTGGATCAC CTGCCGGTGG TGCTCGACTG GTTTAACGGT
CGCCGCACGC CAAACGCTAA TCAGCGTCTG AAAGGCGTCA TTACCGATCT CAATCTCGCC
ACCGACGCGC CAGCGCTGTT TGGCGGTCTG GTCGCTTCGA CCGCCTTCGG CGCGCGCGCC
ATTCAGGAGT GTTTTACCGA TCAGGGTATC GCGGTCAATA ACGTGATGGC GCTTGGCGGC
ATCGCCCGTA AAAATCAGGT CATTATGCAG GTCTGCTGCG ACGTACTGAA TCGTCCGTTG
CAGATCGTCG CTTCCGACCA GTGTTGCGCA TTAGGCGCCG CTATCTTTGC CGCCGTCGCT
GCGAAAGTCC ATGCCGACAT TCCAGCCGCC CAGCAAAGCA TGGCGAGCGC GGTAGAACGC
ACTCTGCGCC CCCACCCTGA ACAGGCGCAA CGCTTCGAAC AGCTTTACCG CCGCTACCAG
CAGTGGGCGC TAAGCGCAGA ACAACATTAT CTTCCGACTG CCGCGCCGGC GCCAACGACC
CCGGCCAATC AGGCAATCCT GACTCATTAA
 
Protein sequence
MAIAIGLDFG SDSVRALAVD CATGDEIATS IEWYPRWQEG RYCDGPNNQF RHHPRDYMES 
MEAALKAVLA QLSAAQRANV VGIGVDSTGS TPAPIDADGN VLALRPEFAE NPNAMFVLWK
DHTAVEEADE ITRLCHKPGK VDYSRYIGGI YSSEWFWAKI LHVTRQDSAV AQAAVSWIEL
CDWVPALLSG TTRPQDIRRG RCSAGHKTLW HESWGGLPPA SFFDELDPCI NRHLRYPLFS
ETFTADLPVG TLCAEWAQRL DLPESVVISG GAFDCHMGAV GAGAQPNTLV KVIGTSTCDI
LIADKQSVGD RAVKGICGQV DGSVVPNFIG LEAGQSAFGD IYAWFSRVLS WPLEQLAAQH
PELKPQINAS QKQLLPALTD AWAKNPSLDH LPVVLDWFNG RRTPNANQRL KGVITDLNLA
TDAPALFGGL VASTAFGARA IQECFTDQGI AVNNVMALGG IARKNQVIMQ VCCDVLNRPL
QIVASDQCCA LGAAIFAAVA AKVHADIPAA QQSMASAVER TLRPHPEQAQ RFEQLYRRYQ
QWALSAEQHY LPTAAPAPTT PANQAILTH