Gene SeHA_C0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0085 
Symbol 
ID6488400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp87380 
End bp88786 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content54% 
IMG OID642740373 
Productputative metabolite transport protein YaaU 
Protein accessionYP_002044047 
Protein GI194448099 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGG AAACGCCTTA TCCGGCCTAC AGATGCGCTT TGCCCGTGTT GAAACAGGAC 
ATCACCATGC AGCAGCCCAG GAACTTTGAT GACCTTAAAT TCTCCTCCAT TCATCGCAGA
ATTATGCTGT GGGGAAGCGG CGGCCCGTTC CTTGATGGCT ACGTGCTGGT GATCATTGGC
GTGGCGCTGG AACAACTGAC GCCGCTATTG CACCTTGATG CTGAATGGAT TGGCGCGCTC
GGCGCGGCTA CGCTTGCCGG ACTGTTTATC GGCACCTCGT TGTTTGGCTA TATTTGCGAT
AAAGTCGGGC GGCGTAAAAT GTTCCTGCTT GATATTATCG CTATCGGCGT TATCTCCGTG
GCGACCATGT TTGTTTCCAC GCCGCTTGAA TTACTGGTGA TGCGCGTTTT AATTGGCATT
GTTATCGGCG CGGATTACCC TATCGCCACT TCCATGATTA CGGAGTTTTC CAACACCCGC
CAGCGCGCGT TCTCCATCGG TTTTATCGCC GCGATGTGGT ACGTCGGCGC GACCTGTGCC
AACCTGGTGG GCTACTGGCT GTATGACATG GAAGGCGGCT GGCGTTGGAT GCTTGGCAGC
GCCTTTATCC CGTGCTTAAT CATTTTGATT GGCCGCTTTG ACCTGCCGGA ATCGCCACGC
TGGCTATTGC GAAAAGGACG GGTAAAAGAG TGCGAACAAA TGATGATCAA ACTGTTCGGC
GAACCGGTCT GCTTTGACGA TGAGCCGCCG CAGGAGACCC GCTTCCTGCA GTTGTTTAAC
CGCCGTCATT TTCCGTTTGT ACTGTTCGTT GCGGCTATCT GGACCTGTCA GGTAATCCCG
ATGTTCGCTA TCTATACCTT TGGGCCGCAG ATCGTCGGGT TACTCGGCTG GGAGCAGGGG
CGCAACGCGG CGCTCGGCAA TGTGGTGATT AGCCTCTTTT TTATGCTGGG CTGTATACCG
GCGATGTTCT GGCTAAACAG TATTGGCCGT CGCCCTCTGC TTATTGGCAG CTTCGCCATG
ATGACTATCG CGCTGGCGCT GCTGGGGCTG GTGTCAAATC TGGGCATCAT ACTGGTCGTG
GTGGCGTTTG CGGTATACGC CTTCTTTTCC GGCGGACCGG GCATACTGCA ATGGCTTTAT
CCTAATGAAC TCTTCCCTAC GGATATTCGC GCTTCGGCCG TGGGGGTCAT CATGTCATTA
AGCCGTATTG GAACTATTAT ATCCACCTGG GCATTACCGA TTTTTATTAC TCGTTACGGT
ATTAATAACG TCATGCTGAT TGGCGCGTTG ATTTCGTTAG TCGGGCTTGG CGTATCGGTG
ATGTTTGCTC CGGAAACTCG CGGCTTGACG CTAACACAGA CCGGAAACAT GACTTTGCGC
GGAACGCCAT CGGATAACCC TCGTTAA
 
Protein sequence
MAAETPYPAY RCALPVLKQD ITMQQPRNFD DLKFSSIHRR IMLWGSGGPF LDGYVLVIIG 
VALEQLTPLL HLDAEWIGAL GAATLAGLFI GTSLFGYICD KVGRRKMFLL DIIAIGVISV
ATMFVSTPLE LLVMRVLIGI VIGADYPIAT SMITEFSNTR QRAFSIGFIA AMWYVGATCA
NLVGYWLYDM EGGWRWMLGS AFIPCLIILI GRFDLPESPR WLLRKGRVKE CEQMMIKLFG
EPVCFDDEPP QETRFLQLFN RRHFPFVLFV AAIWTCQVIP MFAIYTFGPQ IVGLLGWEQG
RNAALGNVVI SLFFMLGCIP AMFWLNSIGR RPLLIGSFAM MTIALALLGL VSNLGIILVV
VAFAVYAFFS GGPGILQWLY PNELFPTDIR ASAVGVIMSL SRIGTIISTW ALPIFITRYG
INNVMLIGAL ISLVGLGVSV MFAPETRGLT LTQTGNMTLR GTPSDNPR