| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C0071 |
|---|
| Symbol | carB |
|---|
| ID | 6491670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 72325 |
|---|
| End bp | 75552 |
|---|
| Gene Length | 3228 bp |
|---|
| Protein Length | 1075 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642740360 |
|---|
| Product | carbamoyl phosphate synthase large subunit |
|---|
| Protein accession | YP_002044034 |
|---|
| Protein GI | 194447884 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
|---|
| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 80 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAAC GTACAGATAT AAAAAGCATC CTGATTCTGG GCGCGGGCCC GATTGTTATC
GGTCAGGCGT GTGAGTTTGA CTACTCCGGC GCTCAGGCAT GTAAAGCGCT GCGCGAAGAG
GGTTACCGCG TTATTCTGGT GAACTCCAAC CCGGCCACCA TCATGACCGA CCCGGAAATG
GCCGATGCCA CCTACATCGA GCCGATTCAC TGGGAAGTGG TGCGCAAAAT CATCGAAAAA
GAGCGTCCGG ATGCGGTGCT GCCGACCATG GGCGGCCAGA CCGCGCTGAA CTGTGCGCTG
GAGCTGGAGC GTCAGGGCGT GCTCGAAGAG TTCGGTGTGA CCATGATTGG CGCCACCGCC
GACGCCATTG ATAAAGCCGA AGACCGTCGT CGCTTCGATA TCGCGATGAA GAAAATTGGT
CTCGACACCG CGCGTTCCGG TATCGCGCAC ACTATGGAAG AAGCGCTGGC GGTTGCCGCT
GACGTGGGCT TCCCGTGCAT CATCCGTCCG TCCTTTACCA TGGGCGGCAC CGGCGGCGGT
ATCGCTTACA ACCGTGAAGA GTTCGAAGAA ATCTGCGAAC GCGGTCTGGA CCTCTCGCCA
ACCAACGAGC TGCTGATTGA TGAATCGCTG ATCGGCTGGA AAGAGTACGA GATGGAAGTG
GTGCGTGATA AAAACGACAA CTGCATCATC GTCTGCTCTA TCGAAAACTT CGATGCGATG
GGTATCCACA CCGGTGACTC CATCACCGTG GCCCCGGCAC AGACGCTGAC CGACAAAGAA
TACCAAATCA TGCGTAACGC CTCGATGGCG GTACTGCGTG AAATCGGCGT CGAAACCGGC
GGTTCTAACG TCCAGTTCGC CGTGAACCCG AAAAACGGCC GTCTGATCGT TATCGAAATG
AACCCGCGCG TCTCCCGCTC CTCGGCGCTG GCGTCGAAAG CCACCGGTTT CCCGATTGCT
AAAGTGGCGG CCAAACTGGC GGTGGGTTAT ACCCTCGACG AGCTGATGAA CGACATCACC
GGTGGCCGTA CGCCGGCGTC GTTTGAGCCG TCTATTGACT ACGTTGTCAC CAAAATTCCG
CGCTTTAACT TTGAGAAATT CGCCGGTGCT AACGACCGTC TGACCACCCA GATGAAATCG
GTCGGGGAAG TGATGGCGAT TGGCCGCACC CAGCAGGAAT CCCTGCAAAA AGCGCTGCGC
GGCCTGGAAG TGGGCGCCAC CGGCTTCGAC CCGAAAGTCA GCCTCGACGA CCCGGAAGCG
CTGACCAAAA TCCGCCGCGA GCTGAAAGAC GCGGGCGCGG ATCGTATCTG GTATATCGCC
GATGCCTTCC GCGCAGGCCT CTCCGTCGAC GGCGTGTTCA ACCTGACCAA CATCGACCGC
TGGTTCCTGG TGCAAATTGA AGAGCTGGTG CGTCTGGAAG AGAAAGTAAC TGAAGTCGGG
ATTACTGGCC TCAACGCCGA CTTCCTGCGT CAGCTCAAGC GTAAAGGTTT TGCCGATGCG
CGTCTGGCAA AATTGGCGGG CGTGCGCGAG GCGGAAATCC GCAAACTGCG CGACCAGTAT
GACCTGCACC CGGTTTACAA ACGCGTGGAT ACCTGCGCGG CGGAATTCGC CACCGATACC
GCCTACATGT ACTCCACTTA TGAAGATGAG TGCGAAGCGA ACCCGTCCGT TGACCGCGAT
AAAATCATGG TCCTCGGCGG CGGCCCGAAC CGTATCGGCC AGGGTATCGA ATTTGACTAC
TGCTGCGTAC ACGCCTCGCT GGCGCTGCGC GAAGACGGTT ACGAGACCAT CATGGTCAAC
TGTAACCCGG AAACCGTCTC CACCGACTAC GACACTTCCG ACCGTCTGTA CTTCGAGCCG
GTGACGCTGG AAGACGTGCT GGAAATCGTG CGCATCGAGA AGCCGAAAGG CGTTATCGTG
CAGTACGGCG GCCAGACCCC GCTGAAGCTG GCGCGCGCGC TGGAAGCGGC AGGCGTGCCG
GTTATCGGCA CCAGCCCGGA CGCCATCGAC CGCGCGGAAG ACCGTGAACG CTTCCAGCAT
GCGGTTGACC GTCTGAAGCT GAAGCAACCG GCCAACGCCA CCGTCACCGC CATTGAACAG
GCTGTCGAAA AAGCGAAAGA GATCGGCTAC CCGCTGGTGG TGCGTCCTTC TTACGTGCTG
GGCGGCCGGG CGATGGAAAT TGTCTATGAC GAAGCCGATC TGCGTCGCTA CTTCCAGACA
GCGGTCAGCG TCTCTAACGA TGCGCCGGTG CTGCTGGACC GCTTCCTTGA TGACGCGGTT
GAAGTGGACG TGGACGCTAT CTGCGACGGC GAAATGGTGC TGATTGGCGG CATCATGGAA
CACATAGAGC AGGCGGGCGT ACACTCCGGC GACTCCGCCT GTTCCCTGCC GGCCTACACG
CTGAGCCAGG AGATTCAGGA TGTGATGCGC CAACAGGTGC AGAAGCTGGC CTTCGAGTTG
CAGGTGCGCG GCCTGATGAA CGTGCAGTTT GCGGTGAAAG ACAACGAAGT CTATCTGATT
GAAGTCAACC CGCGTGCGGC GCGTACCGTA CCGTTCGTCT CCAAAGCCAC CGGCGTTCCG
CTGGCGAAAG TGGCGGCGCG CGTGATGGCC GGCAAATCGC TGACCGAGCA GGGCGTGACC
CAAGAAATTA TCCCGCCGTA CTACTCGGTG AAAGAAGTGG TGCTGCCGTT CAACAAATTC
CCGGGCGTTG ACCCGCTGTT AGGGCCAGAA ATGCGCTCCA CCGGGGAAGT GATGGGCGTG
GGCCGTACCT TCGCGGAGGC GTTCGCTAAG GCGCAGCTGG GCAGTAACTC CACCATGAAG
AAACAGGGCC GTGCGCTGCT CTCCGTTCGC GAAGGCGACA AAGAGCGCGT GGTGGACCTG
GCCGCTAAGC TGCTGAAACA GGGCTTCGAG CTGGATGCTA CCCACGGTAC GGCGATTGTG
CTGGGCGAAG CCGGTATCAA CCCGCGTCTG GTGAACAAGG TGCACGAAGG TCGTCCGCAC
ATTCAGGACC GTATCAAGAA TGGCGAATAT ACCTACATCA TCAACACCAC CGCAGGTCGC
CGCGCGATTG AAGACTCCAG GGTGATTCGC CGCAGCGCGC TGCAGTACAA GGTGCATTAT
GACACCACGC TGAACGGCGG TTTTGCCACG ACGATGGCGC TCAATGCCGA TGCCACCGAG
AAGGTAACCT CGGTGCAGGA AATGCACGCG CAGATCAAAA AGTCGTAA
|
|---|
| Protein sequence | MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEM
ADATYIEPIH WEVVRKIIEK ERPDAVLPTM GGQTALNCAL ELERQGVLEE FGVTMIGATA
DAIDKAEDRR RFDIAMKKIG LDTARSGIAH TMEEALAVAA DVGFPCIIRP SFTMGGTGGG
IAYNREEFEE ICERGLDLSP TNELLIDESL IGWKEYEMEV VRDKNDNCII VCSIENFDAM
GIHTGDSITV APAQTLTDKE YQIMRNASMA VLREIGVETG GSNVQFAVNP KNGRLIVIEM
NPRVSRSSAL ASKATGFPIA KVAAKLAVGY TLDELMNDIT GGRTPASFEP SIDYVVTKIP
RFNFEKFAGA NDRLTTQMKS VGEVMAIGRT QQESLQKALR GLEVGATGFD PKVSLDDPEA
LTKIRRELKD AGADRIWYIA DAFRAGLSVD GVFNLTNIDR WFLVQIEELV RLEEKVTEVG
ITGLNADFLR QLKRKGFADA RLAKLAGVRE AEIRKLRDQY DLHPVYKRVD TCAAEFATDT
AYMYSTYEDE CEANPSVDRD KIMVLGGGPN RIGQGIEFDY CCVHASLALR EDGYETIMVN
CNPETVSTDY DTSDRLYFEP VTLEDVLEIV RIEKPKGVIV QYGGQTPLKL ARALEAAGVP
VIGTSPDAID RAEDRERFQH AVDRLKLKQP ANATVTAIEQ AVEKAKEIGY PLVVRPSYVL
GGRAMEIVYD EADLRRYFQT AVSVSNDAPV LLDRFLDDAV EVDVDAICDG EMVLIGGIME
HIEQAGVHSG DSACSLPAYT LSQEIQDVMR QQVQKLAFEL QVRGLMNVQF AVKDNEVYLI
EVNPRAARTV PFVSKATGVP LAKVAARVMA GKSLTEQGVT QEIIPPYYSV KEVVLPFNKF
PGVDPLLGPE MRSTGEVMGV GRTFAEAFAK AQLGSNSTMK KQGRALLSVR EGDKERVVDL
AAKLLKQGFE LDATHGTAIV LGEAGINPRL VNKVHEGRPH IQDRIKNGEY TYIINTTAGR
RAIEDSRVIR RSALQYKVHY DTTLNGGFAT TMALNADATE KVTSVQEMHA QIKKS
|
|---|
| |