Gene SeHA_C0064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0064 
SymbolcitE 
ID6488758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp65457 
End bp66326 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content55% 
IMG OID642740353 
Productcitrate (pro-3S)-lyase subunit beta 
Protein accessionYP_002044027 
Protein GI194449708 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID[TIGR01588] citrate lyase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCAC GTCGCAGTAT GTTGTTTATC CCCGGCGCAA ATGCGGCCAT GTTGAGTACC 
TCGTTTGTCT ATGGTGCGGA CGCGGTGATG TTCGACTTAG AAGACGCCGT AGCGTTACGT
GAGAAAGATA CCGCCCGTCT TTTAGTCCAT CACGCGCTTC AACATCCGTT CTATCAGGAT
GTTGAAAAAG TGGTGCGCAT TAATCCACTG AACACGCCGT TTGGTCTGGC CGATCTTGAA
GCCGTCGTGC GTGGTGGCGC GGATATCGTG CGTCTGCCGA AAACCGACAG CAAAAACGAT
GTGCTGGAGC TGGAAGCGCA GGTCGAACGG ATCGAACGTG AATGTGGACG CGCGGTCGGC
AGTACCAGGC TGATGGCGGC GATCGAATCA GCGAAAGGCG TGGTCAATGC CGTCGACATC
GCCACCTCCA GCCCGCGCAT GGTGGCAATT GCGCTGGCGG CATTTGATTA CGTGATGGAT
ATGGGCACCT GCCGGGGCGA TGGCACCGAG CTGTTCTACG CCCGCTGCGC AGTGCTGCAT
GCGGCGCGCG TTGCGGGTAT TGCCGCCTAT GATGTCGTTT GGTCGGATAT CAATAATGAA
GAAGGCTTCC TGAAGGAAGT GCAGTTGGCG AAAGGGCTTG GTTTTAATGG TAAGTCCTTA
GTGAACCCAC GTCAGATTGA GCTGTTACAT CAGGCTTATT CTCCGACACG TAAAGAAGTT
GAGCATGCGT ATGAGGTGAT TGCCGCCGCT GAAGAGGCTG AGTCTCGCGG TCTGGGCGTC
GTTTCACTCA ACGGCAAAAT GATTGACGGC CCGATTATCG ACCACGCGCG CAAAGTGGTG
GCGCTGTCGG CTTCCGGTAT TCGTGATTAA
 
Protein sequence
MRPRRSMLFI PGANAAMLST SFVYGADAVM FDLEDAVALR EKDTARLLVH HALQHPFYQD 
VEKVVRINPL NTPFGLADLE AVVRGGADIV RLPKTDSKND VLELEAQVER IERECGRAVG
STRLMAAIES AKGVVNAVDI ATSSPRMVAI ALAAFDYVMD MGTCRGDGTE LFYARCAVLH
AARVAGIAAY DVVWSDINNE EGFLKEVQLA KGLGFNGKSL VNPRQIELLH QAYSPTRKEV
EHAYEVIAAA EEAESRGLGV VSLNGKMIDG PIIDHARKVV ALSASGIRD