Gene SeHA_C0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0040 
Symbol 
ID6492295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp39706 
End bp40959 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content50% 
IMG OID642740331 
Producthypothetical protein 
Protein accessionYP_002044005 
Protein GI194451119 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.204135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCCA ATATTAATGT GGACTGCTGT AAAACGCCGG GATGTAAAAA TCTGGGCGTG 
TTGAACAGTC CGGATTATGT CCGCCAGGGA AAAGATGTTC TTTGTCGGGA ATGTGGTTTC 
CTGTTTCCTG TTATTTCCGC TGGGGCGTTA AATCTTTTTC GCCACACGGT AAACCGGGGA 
TGGAAAGGCC TGGTCAAACA GTGTCCTGCC TGCGGCAGCA CCTCATTAAA GAAATACGGC 
TTCTCGACTC AGGGCGAACA CCGCATGGCG TGTAGTCAGT GTCGGAAAAC GTTCATCGTC 
CCCGAAAAGG CAAAAAGCGA TTGCCGACAG GACGAGCTGG CAACCCTAAT TGAGGAAGGG 
ACGTCGCTTG CCGGGATCCG CTCACAGCTG AAATTAGACA GCACAGGTCT TAACCGGGCG 
CTGTTTAAAC TATCCCGTAA TGCAAACCTT GCAGAGCGAT GCCAGCAGTT TCCGGCCTTC 
GATATCGCAC TCAGCACCCG CGCTTTCAGG GTGAACTATA ACGGTGGAGA CAGCAGCCTG 
TATGTTCTGG TGACGGCAGA AGAACAAAGC GGAAGGGTGG TGGCGATTTC GTCAAATTAT 
TCAGCACAGC CGCTGGATAA AGCCTGGCAG TATCAGTCGT ATTATGAAGA ACGGCTACCT 
CCGGGAACGC TGGCGCATAT GGTGCAACGT AAGGAAGCGA TTACAGCGCG CCGCGAAACT 
TTATTTGATA TCGATTACGG TCCGGCCTCG TTATATAAGA ATGACTCCGG AATGATCGTA 
AAGCCGGTGT TGCCTGCCTA CCGCCATTTT GAACTGGTGC GGATGCTGAC GGACGAACGC 
TCCTTAAACG TTCAGCATTA CCTCGATCAT GAATGCTTTA TTCTGGGGGG ATGCATGATG 
GCGAATATGC CGCATGTCCA TCAGGGCCGT TGCCATATTT CATTTGTCAA AGAACGCGGT 
ACGACGCCGC TGCAAAAAGA TATTCCGCCA CGCCTGTTTT TAAGCGGCGG TATCCGTAAC 
AATGTCTGGC GTACTTTTTC TACCCGCGAT TATGCTATGG CGGTGTGTAA TCTCACCGGT 
AATAAAAAAA TTACCCAGCA ACGTTATGCT ACGTTACAAG GCGCGACGGC GTTCATTAAT 
TATCTGTATG CGCATCCTTT TTTGGCGCAG CTTAATCGTC TGTCACCGGC AAATGTGACG 
GCAACGCTGG ATTATCTGAA GTATGAATAT AATCAATCCC GTAAGGTCGG ATAA
 
Protein sequence
MFANINVDCC KTPGCKNLGV LNSPDYVRQG KDVLCRECGF LFPVISAGAL NLFRHTVNRG 
WKGLVKQCPA CGSTSLKKYG FSTQGEHRMA CSQCRKTFIV PEKAKSDCRQ DELATLIEEG 
TSLAGIRSQL KLDSTGLNRA LFKLSRNANL AERCQQFPAF DIALSTRAFR VNYNGGDSSL 
YVLVTAEEQS GRVVAISSNY SAQPLDKAWQ YQSYYEERLP PGTLAHMVQR KEAITARRET 
LFDIDYGPAS LYKNDSGMIV KPVLPAYRHF ELVRMLTDER SLNVQHYLDH ECFILGGCMM 
ANMPHVHQGR CHISFVKERG TTPLQKDIPP RLFLSGGIRN NVWRTFSTRD YAMAVCNLTG 
NKKITQQRYA TLQGATAFIN YLYAHPFLAQ LNRLSPANVT ATLDYLKYEY NQSRKVG