Gene SeHA_A0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_A0108 
Symbol 
ID6487499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011081 
Strand
Start bp73996 
End bp75183 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content48% 
IMG OID642740269 
Productshufflon-specific DNA recombinase 
Protein accessionYP_002043943 
Protein GI194447281 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCATTAT TTTTTGCCTC TTTTGAGGTT AGCATGCCGT CTCCACGCAT CCGTAAAATG 
TCCCTGTCAC GCGCACTGGA TAAGTACCTG AAAACAGTTT CTGTTCACAA GAAAGGGCAT
CAACAGGAGT TTTACCGGAG CAATGTTATC AAGCGATATC CCATTGCCCT TCGGAATATG
GACGAAATAA CAACCGTTGA TATTGCTACA TACAGAGACG TTCGTTTAGC AGAAATCAAC
CCCCGAACGG GTAAACCCAT TACAGGTAAT ACTGTACGTC TTGAACTCGC CCTTCTGTCA
TCTCTGTTCA ATATTGCTCG TGTTGAATGG GGAACCTGTC GTACTAACCC GGTTGAACTG
GTTCGCAAGC CGAAAGTATC CTCCGGACGA GATCGCCGGC TAACGTCTTC AGAAGAACGT
CGCCTTTCTC GCTATTTCCG CGAAAAAAAT CTGATGTTGT ATGTCATTTT CCATCTTGCC
CTTGAGACAG CCATGCGGCA GGGCGAAATA CTGGCCTTAC GTTGGGAGCA CATTGATTTG
CGCCACGGTG TGGCTCATTT ACCTGAAACC AAAAACGGTC ACTCACGGGA TGTTCCTCTG
TCCAGACGTG CCCGTAACTT TCTTCAGATG ATGCCCGTTA ATCTCCACGG CAATGTTTTT
GATTACACCG CATCCGGCTT TAAAAATGCC TGGAGAATAG CCACACAACG ACTTCGCATC
GAGGACCTGC ATTTTCACGA TCTACGGCAT GAAGCAATAA GCCGCTTCTT CGAACTGGGT
AGCCTGAATG TAATGGAGAT TGCTGCAATA TCAGGACATC GTTCCATGAA TATGCTGAAA
CGGTATACTC ATCTTCGTGC ATGGCAACTG GTCAGTAAAC TTGATGCCCG CCGGCGGCAG
ACACAAAAAG TGGCAGCATG GTTTGTGCCG TATCCTGCCC ATATCACGAC CATCAATGAA
GAAAATGGGC AGAAAGCGCA TCGTATTGAG ATCGGTGATT TTGATAACCT TCACGTCACT
GCCACAACGA AAGAGGAAGC AGTTCACCGC GCCAGTGAGG TTTTGTTGCG TACACTGGCC
ATTGCAGCAC AGAAAGGCGA ACGTGTCCCA TCTCCCGGAG CGTTACCTGT TAACGACCCT
GACTACATTA TGATTTGCCC TCTGAACCCG GGCAGCACCC CGCTGTAA
 
Protein sequence
MALFFASFEV SMPSPRIRKM SLSRALDKYL KTVSVHKKGH QQEFYRSNVI KRYPIALRNM 
DEITTVDIAT YRDVRLAEIN PRTGKPITGN TVRLELALLS SLFNIARVEW GTCRTNPVEL
VRKPKVSSGR DRRLTSSEER RLSRYFREKN LMLYVIFHLA LETAMRQGEI LALRWEHIDL
RHGVAHLPET KNGHSRDVPL SRRARNFLQM MPVNLHGNVF DYTASGFKNA WRIATQRLRI
EDLHFHDLRH EAISRFFELG SLNVMEIAAI SGHRSMNMLK RYTHLRAWQL VSKLDARRRQ
TQKVAAWFVP YPAHITTINE ENGQKAHRIE IGDFDNLHVT ATTKEEAVHR ASEVLLRTLA
IAAQKGERVP SPGALPVNDP DYIMICPLNP GSTPL