Gene SeHA_A0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_A0088 
Symbol 
ID6487594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011081 
Strand
Start bp54370 
End bp57414 
Gene Length3045 bp 
Protein Length1014 aa 
Translation table11 
GC content51% 
IMG OID642740249 
ProductTraU 
Protein accessionYP_002043923 
Protein GI194447253 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.83032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATAA ACCGTTTAAT CTTCACTATC GAAGACTGTC TGAACACGCT ATCCCGTTTC 
TCTGTCGCAA GCAGTTTTGT TGAGTATTGC GATTTACGTA CTGTAATAGG TCTGGACAGA
CAGGATCGTG AACGTCGCCC ATGGCTGAAT TCGCCCTATA TTGCAGCCAC AAAGCGTGGA
GAATATCTCT CTGTCTTTGA AGTCAGCGGT GCTTTCAGGG AAATGGATGA AGCATCCGAC
CAGACTGGCC CAGGTTCACT GGAATCGCTG ATCACCAGCA TGAGTGACAG CCTGAATACG
GCATATAAAA ACAGCGGTCA TAAAATCAGC TTCGTTTTTG AGCGTGATCC TGACATGGGG
AAAGAAGAAA TCGAAGACAT GGTCGCCCCA CAAAAGCGCT CACTGGCTAA TACAGGTATC
CAGTTACAGG ATGTGGTCGA TGAGAAAGTC ACAACACTGT CCCCATGGCT GGTCCGGGAG
CGTTGCTGGC TGGCGATCTG GAGTGGACCC GACCTTATCA GCAACAGCGA TCGCACCGCC
CATGATGAGC TTGTCAGAAG ACTGGCTGAA CGGGTACCGA AAGCACGCTT TGCCCAGTCC
CCCTGGCAGT GGACCTTATC TGCACTGAAA ATCCGCCACG AAGCTTTTCT TGATAATGTG
GAACAGGCAC TGAGACATTC ATCTGATGGC CTGATTCTCC GGCTACTGGA TATACACGAG
GTCGGGCGTG AAATACGTCG TCAGACAGAA CGGCACAGCA CACCGCGTAA CTGGCAACCC
CACCTGCCTG AAGATGCCCA GCCAGCGGGA TATCGCTGGA CTGACGATGA ATCCGTACTA
CATGCTCCTT CATTGCATTT GCAGTTATTC AACACTCAGG TGACCACACA GGGCAACCTG
GTTCAGGCGG GCGGACTCTG GCACGGAATG GTATCGATTA CTTTACCTCC GCAAAATCTG
CAGACGTTTA ACGAACTGGT CCGTGCCGTC CCCCGCGCAG TCCCCTGGCG CATCAGAATG
GATCTGATGC CCGGCGGGAT GAAGGCTCTT AATCTGAAGA AAACGCTTCT GACTTACAGC
AGTTTCATTT CTGCCGTTCG TCCAATGTAT GAATCCGTTA TGGCCCTGGC GGCAACGGAT
GAAAAAGAAC CTGTCTGCAT AATGACCATC ATGGCCTCCA CGTGGGGAAA AACACGTGAA
ATATGCACAC GAAACCAGGC CATTCTGAAA TCAGCCATTG AAGGCTGGGG CGTATGTGGC
ACCACGACAA CATTTGGCGA TCCCCGACGC GCCTGGGTGA ATACCATTCT CGCGGCATCC
GGAGGCTCCG GCCCGGTTCC CCTGTATCCC CCGTTGTCAC ATGCCATCTC GCTTTTCCCG
CTTAACAGGG CAGGCTCTGT CTGGCGAGGC AAAGGGAATC TGATGTTACA TACAGAAGAC
GGTTCCGCAA TTGAGGTTGG TCTGGCGTCA TCCCAACAAA ATAAACATAC AGAACTCGCA
CCAGGCGATC CGGGACTGGG TAAATCAGTT CTGATTAATA CATTGTCGGA AATACAGATA
TCATCTGCTC AGAAAAACCT GCCCTTCATT GCCTATATCG ATAAGGGATA CAGTGCTCAG
GGACTGGTTC AGCTTATTCG CGACAGTCTT CCTCCGGAAA GAAAAGACGA AGCTGTCGGT
ATTATTCTGA GCAATGATCC GGAATACACC CGTAACCTTT TTGACGTGAT GTACGGCGCT
AAAAAGCCTA TTACGCCGGA AAAGAATTTC ATGTCATCGG TGCTGTGTGC TCTCTGTGTC
GATACCGGTA CCGGTCAACC CTGTAACCCC GGAGACACCC GACAAATTAT CAACCAGCTT
ATCGAGCTGG CTTTTAAAGA GTACGGTGAA AATAATCCGC GACTTTATCG CGCCTCAACG
GAAGAACTGG TGGATTCAGC ACTGCAGGAC TCGGGACTGT ATGAAAAACA TGATGCAACC
TGGTGGGCCA GATCAACCTG GTTCGAAGTC CGGGATATGC TCCACAATGC CGGGTATATC
ATGGCGGCTC AGCGGGCACA TTATCAGGCA ATGCCCCAGC TTCCCGAAGT GTCCTCGATG
CTGGGCCATA CCAGTCTCAG GGATGTTTTC GGTACTGTTC AGCGTGATGG TTCAAACGAA
CTTCTGCTGG ACTACATCCG CCGCGCTCTC GAGCAGGGAC ATAACGACTA CCCCATGATA
TCCGGGTATA CCCGGTTTAT GATCAACCCG GAAACCCGGG TCATCGCTGT CGATCTGAAT
AATGTTGCCG GTGACAAAAC GCCTGCAGGC AGGCTTAAAA CCGGCATCAT GTACCTGCTT
GCAGGTCAGA TCGCCGGTGG TGACTTCACC CTGCCACAAT ACAGGGATGA AGTGTTAAAG
CAACTTCCAC GGGAATACCA TGAAATCGCT CTTAAACGTA TTAACCAACT TGATCAGGAG
GTTAAGACAA AAGTTTATGA TGAACTGCAT AACGCCCGGG GCATTGACTT CATCTGGGAA
AATCTGGATA CCCAGGAGCG TGAGCAACGC AAGTTTGCTA TCCGCACGGT TCTGAGTACG
CAGTATCTGA GGGACTACCC GGAAAGCGTT CTTAAGTCAG CAAATACTCT CTGGTTACTG
CGCTACAAAC CCGAAGATAT CCCCGTACTG AGGGATAACT TCAACGTTCC TGAATTTATG
CTGAAACGCT TCCTGAAAAT GCCGGAAGGC CCGGCACCAG ATGGTAGTGG TGTTCCTGTT
CTGGGAGTAT TCAGGGTAAA AAGTGGCACG CTTGCGAGAA TACTCAAATT TACCGTCGGT
CCACTGGAGC TATGGGCGCT GAACTCATCG CCAAAAGACA GTGCCCTGCG TAAAACACTG
ACAAATAAGT TAGGTTCAGT TCGGGCACGT AAGATTCTGG CCGAAAACTT CCCCAGAGGT
TCTGCAACGT CATTAATTGA GCACCGGGCG GGCCAACATA ACAGTGACAA TGTTATTGAA
GAACTGGCCT CGGAGCTCAT CCGAAAACAG GGATACAATC TCTGA
 
Protein sequence
MNINRLIFTI EDCLNTLSRF SVASSFVEYC DLRTVIGLDR QDRERRPWLN SPYIAATKRG 
EYLSVFEVSG AFREMDEASD QTGPGSLESL ITSMSDSLNT AYKNSGHKIS FVFERDPDMG
KEEIEDMVAP QKRSLANTGI QLQDVVDEKV TTLSPWLVRE RCWLAIWSGP DLISNSDRTA
HDELVRRLAE RVPKARFAQS PWQWTLSALK IRHEAFLDNV EQALRHSSDG LILRLLDIHE
VGREIRRQTE RHSTPRNWQP HLPEDAQPAG YRWTDDESVL HAPSLHLQLF NTQVTTQGNL
VQAGGLWHGM VSITLPPQNL QTFNELVRAV PRAVPWRIRM DLMPGGMKAL NLKKTLLTYS
SFISAVRPMY ESVMALAATD EKEPVCIMTI MASTWGKTRE ICTRNQAILK SAIEGWGVCG
TTTTFGDPRR AWVNTILAAS GGSGPVPLYP PLSHAISLFP LNRAGSVWRG KGNLMLHTED
GSAIEVGLAS SQQNKHTELA PGDPGLGKSV LINTLSEIQI SSAQKNLPFI AYIDKGYSAQ
GLVQLIRDSL PPERKDEAVG IILSNDPEYT RNLFDVMYGA KKPITPEKNF MSSVLCALCV
DTGTGQPCNP GDTRQIINQL IELAFKEYGE NNPRLYRAST EELVDSALQD SGLYEKHDAT
WWARSTWFEV RDMLHNAGYI MAAQRAHYQA MPQLPEVSSM LGHTSLRDVF GTVQRDGSNE
LLLDYIRRAL EQGHNDYPMI SGYTRFMINP ETRVIAVDLN NVAGDKTPAG RLKTGIMYLL
AGQIAGGDFT LPQYRDEVLK QLPREYHEIA LKRINQLDQE VKTKVYDELH NARGIDFIWE
NLDTQEREQR KFAIRTVLST QYLRDYPESV LKSANTLWLL RYKPEDIPVL RDNFNVPEFM
LKRFLKMPEG PAPDGSGVPV LGVFRVKSGT LARILKFTVG PLELWALNSS PKDSALRKTL
TNKLGSVRAR KILAENFPRG SATSLIEHRA GQHNSDNVIE ELASELIRKQ GYNL