Gene SeHA_A0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_A0086 
Symbol 
ID6487506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011081 
Strand- 
Start bp52587 
End bp53789 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content53% 
IMG OID642740247 
Productlipoprotein 
Protein accessionYP_002043921 
Protein GI194447292 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0606562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.65665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGAA AAACATTACT CGCAGCCCTT ATAGCCACCC TGAGTGGAAC GGCATGCCAG 
GCTCATGCTT ATTCAGTCAC CGTCGTCGCC AGCCGGCCTG TTGAAGAGCA GGTCATCCCC 
AGAATGGAAG CCATCAAAGA TGTCCTTGGC AACATACTGA GTACCCAGAC AGCCACGGGT 
ACCGCTATCA ATCAGAACTC TGAAAAGCTG GCAAGTGTCA TTGCCCAGAA CGGACAGGCG 
ACACGTCAGC AGATGATTTT CAGTAATGAA ACTCAGCGCC TCGAGGAGGC ACGGAAAAGT 
TTCACCGTGC CAGACTCCAT CTGCAGTGAA TCCGCATCAG GGATTGCAAC AGAAAGCAAA 
AGTGCCTCAG CATCCGCAGC CTCAAAACTC AGTAAAGGTG GCGGTGTGAG CAACCGTAGC 
ATCCGCGACC GTCTGGCCAG CGCAGCAAAC TCTCCCGTGC GGGAAGCTTA TGATGGCGCG 
GCCATACACG CCAGTTACTG TACAGAAGCA GAATATGCAC GTTTTGGAGG AACCGCCGTT 
TGTCCTTCTG TGGGCGAAAT ACCAGGTGGA GACAGTCAGG TACGCTCGAT TTACCACGGC 
GCAGGTACAG CGGACACACC TGCGGCACTG ACATGGGATC AGAAGCAAAT AGATGCAGCG 
ACTGCTTACA TGAAAAACAC TTCCCGCCCC TCTGCCGGTC GTGCTCTGGG TAAAGGAGAA 
GTAAATACCC AGAGTGGACG AACCTACGTC GGACTCCAGA ACGAATACAA CGGCATCATT 
GATTCTGCGT CGAATCCCCA ACTGACGCTG ATTGCTGACA GCACGCCTGA TGAAACCACA 
CGTAAAGCAC TGGCTGAAAC ACTGCAGTCA GACTCAGCGG CCGCTTACTT CGACCAGGTG 
GCTTCACCAG AAGCAAAAGC ACGGGGATAT ATGAGTACCC GTGAGTTTGA AGCTTTTGAG 
GCTGGCCGGC GCTACGCCAA CACAGCATAC CTGGTGGATT TACAGGAAAT GCAGGGGGAT 
AACCTGCTCC GTGAACTGGT AAGAATCACT GCGCAAATGA ACTGGCAGCT GAACGATCTG 
AAAGAACAGA TCCGCCAGGG TAATGTTATC TCTGGCCAGC AACTGGCTCT GACTGCCCGC 
CAGTATTATG AAAAACAACT CGGTAGCCTT GAGAAAACAA TCAATCAGGC AAACGCACGT 
TGA
 
Protein sequence
MQRKTLLAAL IATLSGTACQ AHAYSVTVVA SRPVEEQVIP RMEAIKDVLG NILSTQTATG 
TAINQNSEKL ASVIAQNGQA TRQQMIFSNE TQRLEEARKS FTVPDSICSE SASGIATESK 
SASASAASKL SKGGGVSNRS IRDRLASAAN SPVREAYDGA AIHASYCTEA EYARFGGTAV 
CPSVGEIPGG DSQVRSIYHG AGTADTPAAL TWDQKQIDAA TAYMKNTSRP SAGRALGKGE 
VNTQSGRTYV GLQNEYNGII DSASNPQLTL IADSTPDETT RKALAETLQS DSAAAYFDQV 
ASPEAKARGY MSTREFEAFE AGRRYANTAY LVDLQEMQGD NLLRELVRIT AQMNWQLNDL 
KEQIRQGNVI SGQQLALTAR QYYEKQLGSL EKTINQANAR