Gene SeHA_A0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_A0065 
Symbol 
ID6487544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011081 
Strand
Start bp35504 
End bp36445 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content54% 
IMG OID642740226 
Producthypothetical protein 
Protein accessionYP_002043900 
Protein GI194447227 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0980043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0000000385113 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGTAAGA AGAAAAACAC CACAACGCCC ACGCCGCATG ATGCCGCGTT CCGGTCGTTC 
CTGGCGAATC CCGACGTCGC CAGAGATTTT CTGGAACTGC ATCTTCCTGC GGAGTACCGG
CAGTTGTGCG ACCTGTCCAC GCTGAAGCTG GAACCCGCCA CCTTTGTTGA GCCGGACCTG
CATCAGTACG CCAGCGATAT CCTCTGGAGC GTGAAAACCA CCGGGGGTGA AGATGGTTAT
GTTTATACGC TCATCGAGCA CCAGAGCACC GAAAATCTGT ACATGCCTTT TCGCATGTTA
CGCTACAGTG TGGCGGCGAT GCAGAGACAT CTGGAGCAGC ACAAAACGTT GCCACTGGTC
ATTCCGGTGC TGTTCTATCA CGGTGAGCGC AGCCCGTACC CGTACAGCAT GAACTGGCTG
GACTGTTTTG AGAATCCGGC GCTTGCGGCT AAAATATACA CAAAGCCGTT TCCGCTGGTT
GATATCACTG TCGTTGATGA CAATGAAATC ATGAACCATC GCCGGATGGC CGCACTGACG
CTGCTGATGA AGCATATCCG TCAGCGGGAT ATGCTGATGT GTCTGGACAA CCTGGTCAGA
GCACTGCAGG ACATCCAGGA TGAAGAGCAG ATTACAGTTC TTTTCAACTA TCTGCTTAAT
GGCAGCGAAC ATGTAACGGT TGAATTTTTG CAGACGCTGG CGCAGCGACT GCCGCAGCAC
GAGGACAGCA TTATGACACT GGCAGAACGT CTTAAGCAGG AAGGTATCCA GCAAGGTATC
CAGCAGGGTA TCCAGCAGGG TATCCAGCAG GGAGTTCAGC AGGGGGCGCT TCAAAAAGCA
CGGGAAATCG CCCGGGAGCT CCGGAACGCG GGAATGCCGG CAGCACAAAT CTGTCAGCTG
ACCGGACTTT CTGAAGCTGA ACTGAAGAAC ATCACTCACT GA
 
Protein sequence
MSKKKNTTTP TPHDAAFRSF LANPDVARDF LELHLPAEYR QLCDLSTLKL EPATFVEPDL 
HQYASDILWS VKTTGGEDGY VYTLIEHQST ENLYMPFRML RYSVAAMQRH LEQHKTLPLV
IPVLFYHGER SPYPYSMNWL DCFENPALAA KIYTKPFPLV DITVVDDNEI MNHRRMAALT
LLMKHIRQRD MLMCLDNLVR ALQDIQDEEQ ITVLFNYLLN GSEHVTVEFL QTLAQRLPQH
EDSIMTLAER LKQEGIQQGI QQGIQQGIQQ GVQQGALQKA REIARELRNA GMPAAQICQL
TGLSEAELKN ITH