| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4903 |
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| Symbol | |
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| ID | 6482785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 4776326 |
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| End bp | 4777051 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642740114 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_002043791 |
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| Protein GI | 194444590 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.650668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCAG GATGCTGCAA AAATGGACTT ATTATCAGTA AAACCCCTCT TATACAGGAA
GGCCTTAAAG GGGCTATAAC AGGTAATTTC CCCGATTATA AACTGGCGTA TTGTCGTACG
ATAGAAGAGC TAACGCTGCT ACAGCTACGC CGGAGTAATT TAGTTATTGC TGATTTAGCA
GTTAACAATG CCTCTTCCCG CGCTATCTGC GAATATTTTT ATAGCTTAAT CTCGCAATAT
CGCGACATAC ATTGGGTATT TCTGGTTCCT AAATCCTGCT ATCCACATGC GGTTGATCTC
CTGATGGGCC CCGTCAGCAC CTTGCTTTCA GACGAAGAGC CAATCGAGAA TCATATTAGC
GTTATCCATG CGGGAAACGC TCGCTCAGAA AGAATAAGTA AAACGTTATT ATCGCCTCAG
GTACCGTCTG AAATTCAGCA GTCCCACGAC AGGCCGATTG TCCTTACGCT GTCTGAACGA
AAAGTATTAC GCCTTTTAGG AAAAGGGTGG GGCATTAACC AAATTGCGGC GTTACTTAAA
AAAAGTAATA AAACAATTAG CGCCCAAAAA AATAGCGCCA TGCGACGCTT ATCAATACAC
AGTAATGCAG AGATGTATGC ATGGATAAAC AGTTCTCAGG GAGCCAGAGA ATTGAACCTA
CCTTCGGTAT ATGGAGAAAC CATGGAATGG AAAACAGAAT CAGCAAGAGA AATGTTGCGC
TCGTAG
|
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| Protein sequence | MLPGCCKNGL IISKTPLIQE GLKGAITGNF PDYKLAYCRT IEELTLLQLR RSNLVIADLA
VNNASSRAIC EYFYSLISQY RDIHWVFLVP KSCYPHAVDL LMGPVSTLLS DEEPIENHIS
VIHAGNARSE RISKTLLSPQ VPSEIQQSHD RPIVLTLSER KVLRLLGKGW GINQIAALLK
KSNKTISAQK NSAMRRLSIH SNAEMYAWIN SSQGARELNL PSVYGETMEW KTESAREMLR
S
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