Gene SNSL254_A4900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4900 
Symbol 
ID6484871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp4774373 
End bp4774846 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content54% 
IMG OID642740111 
Producthypothetical protein 
Protein accessionYP_002043788 
Protein GI194445459 
COG category[S] Function unknown 
COG ID[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.816628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATAA TCGACTTTTT ACTGGCGCTA ATGCAGGACA TGATCTTGTC TGCGATCCCC 
GCCGTCGGGT TTGCGATGGT CTTTAATGTT CCCCACCGGG CGCTTCCGTG GTGCGCGCTA 
CTGGGGGCGC TGGGTCATGG CTCGCGTATG CTGATGATGA GCGCTGGCTT TAATATCGAA 
TGGTCGACGT TTATGGCTTC GCTGCTGGTC GGCAGTATTG GTATTCAGTG GTCACGCTGG 
TATCTCGCTC ACCCTAAAGT GTTTACCGTC GCGGCCGTGA TCCCGATGTT TCCGGGGATT 
TCCGCCTATA CCGCGATGAT TTCCGCAGTA AAAATTAGCC ATCTGGGCTA TAGCGAACCG 
ATGATGATCA CGCTGCTGAC CAATTTTCTG AAAGCCTCTT CCATTGTTGG CGCACTCTCA 
ATTGGCCTCT CTGTACCGGG ATTATGGCTG TACCGCAAAC GCCCCCGCGT GTGA
 
Protein sequence
MGIIDFLLAL MQDMILSAIP AVGFAMVFNV PHRALPWCAL LGALGHGSRM LMMSAGFNIE 
WSTFMASLLV GSIGIQWSRW YLAHPKVFTV AAVIPMFPGI SAYTAMISAV KISHLGYSEP 
MMITLLTNFL KASSIVGALS IGLSVPGLWL YRKRPRV