Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4861 |
Symbol | |
ID | 6485992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4730452 |
End bp | 4731225 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642740072 |
Product | DNA-binding transcriptional repressor UxuR |
Protein accession | YP_002043749 |
Protein GI | 194444601 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 0.25238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCAA ACACTTCTCA GCAAAGACCT TACCAGGAAG TGGGCGCAAT GATACGGGAT CTGATTGTTC AGACGCCGTA CCGCCCCGGG GAGCGCTTGC CGCCGGAAAG AGAGATCGCT GAGAGGCTCA ATGTGACGCG TACCGTCGTG CGTGAAGCGC TGATCATGCT GGAAATTAAA GGTCTGGTTG AAGTCCGCCG CGGCGCCGGG ATCTACGTGC TCGACAGCGC GGATAATAAC GAGATGGAAG GCGCTGACGT CAATCACTGT AATGACGCCG GGCCTTTTGA ACTGTTGCAG GCGCGTCAGT TGCTGGAAAG CAATATCGCT GAATTTGCCG CTCTGCAGGC CACCCGCGAA GACATCATTA AAATGCGCCA GGCGTTACAA CTGGAAGAGC GAGAGCTCGC CTCCAGCGCG CCGGGCGGCT CAGAAAGCGG CGATATGCAG TTTCATCTGG CCATTGCCGA AGCGACCCAT AACAGTATGT TGGTAGAGCT CTTCCGTCAG TCCTGGCAAT GGCGTGAAAA TAATCCGATG TGGCTCCAGC TTCATAGCCA TCTGGGCGAT ACGCTTTACC GTAAGGAGTG GCTGGTCGAT CATAAGCAGA TCCTCGCGGC GTTAATTAAG AAAGACGCCC GCGCAGCGAA GCTGGCGATG TGGCAGCACC TGGAAAACGT GAAGCAGCGT CTGCTGGAGT TTTCCAATGT TGATGACATC TACTTTGATG GCTATCTGTT TGAGTCATGG CCGCTGGACA ACGTTGATGC CTGA
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Protein sequence | MKSNTSQQRP YQEVGAMIRD LIVQTPYRPG ERLPPEREIA ERLNVTRTVV REALIMLEIK GLVEVRRGAG IYVLDSADNN EMEGADVNHC NDAGPFELLQ ARQLLESNIA EFAALQATRE DIIKMRQALQ LEERELASSA PGGSESGDMQ FHLAIAEATH NSMLVELFRQ SWQWRENNPM WLQLHSHLGD TLYRKEWLVD HKQILAALIK KDARAAKLAM WQHLENVKQR LLEFSNVDDI YFDGYLFESW PLDNVDA
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