Gene SNSL254_A4852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4852 
Symbol 
ID6485723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4724514 
End bp4726139 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content55% 
IMG OID642740063 
Productputative SAM-dependent methyltransferase 
Protein accessionYP_002043740 
Protein GI194443138 
COG category[H] Coenzyme transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.0491612 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCA GCGCCGTTAT TTTTGCAACG CATCACATTC GGCTATTACC CGATGAAGGC 
AAAATCCCCT GGGACGAGCC AGCCTTCAGC CAACGCATGC TGGAAAATCA TCTGTCGCAG
GACCACGACT GGGCCAGCCG CCGGCTAACC GTGATTGAGC AACAGGTAAC ATGGATTACC
CGTCAGTTAC CCGCTGGCGC CCGCATTCTG GATCTCGGCT GTGGCCCCGG TTTTTATACC
CGCCTGTTAG CGGAGCGTGG GTTTCACTGC ACAGGCGTAG ATTTCTCTCC GGCATCCATC
ACATGGGCTC GCCAGCAGGC GCAAGCCGCA AACCTGAATA TTGACTACAT TCAGCAGGAT
ATTCGTACAT ACCACCCCAC GGAACCTTTT GATTTCATTA TGATGACGTT TGGGGAACTG
AATGCCTTTA GCGCTGCGGA TGCGCAAAGC CTCATCAGTC ATTGCGCTCA GTGGTTGAAA
CCGGATGGCA AACTGCTTGT TGAAGTGCAT ACCTTCGATG AAGTTAAACG CCAGGGCATG
GCGCAGCCAG GCTGGCAGCG TTGTCCGCAC GGCCTGTTTC TTGCCGTGCC TCATCTGCTG
TTAACGGAAA ATGCCTGGGA TGAAGAGGCC CAAACCAGCT CAACGCAGTT CTGGGCGATA
GCGGAAAACG GCTGTACCAC CCGTTTCGGC AGTCAAATGA AGGCCTGGCG CGATGATGAA
TATATCAGCC TGCTTGGTGA TGCTGGCTTC ACTGTGTTGC AGCGCCCGGA CAGTCACACC
TGGCCGGTCG GCGAGACTTT TGCAGGCAAG CTGTTTGCGC TGCTGGCTGA AAAAGCCCCT
CCCGCTGAGG GAATCGCCCT CAGTAAAAGG AATAACCCAA TGGATATCCC ACGTATTTTT
ACCATTAGCG AAAGCGAACA CCGTATCCAT AATCCGTTTA CAGCGGAAAA GTACGCCACG
CTGGGCCATG CGTTACGCAT GAAACCAGGC ACGCGGATTC TCGATCTCGG TAGCGGTTCG
GGTGAGATGC TCTGCACCTG GGCTCGCGAT TACGGTGTTA CAGGTACTGG CATTGATATA
AGCCCGCTCT TCACCACACA GGCAAAACAA CGTGCAGAAG AGCTCGGCGT CAGTGAATAT
GTACATTTTA TTCATAACGA CGCGGCCGGT TATATCGACG AGGAAAAATA TGACGTGGCG
GCCTGCGTAG GCGCTACCTG GATTGCGGGC GGTGTCGCGG GGACAATAGA TCTGCTGGCC
AAAAGCCTCA AACCAGGCGG GATCATTCTC ATCGGTGAAC CGTACTGGCG TCGGATCCCC
GCAACGGAAG AGATCGCCCA CGCCTGTGGC GTCTCATCCG TCGCCGATTT TCGTCCCCTG
CCCGAGCTGG TCGCCTTTTT CGACCAACTC GGCTATGACG TAGTGGAAAT GGTGCTGGCA
GACCCGCAAG GCTGGGACAG ATATGAAGCC GCGAAGTGGA TGACCATGCG CCGCTGGCTG
GAGGAAAACC CTGACGATGC GTTTGCACAA GAGGTTCGAA CAGAACTGAC GGTAGCCCCC
AAACGCCACG TCACCTGGAC GCGAGAATAC TTTGGCTGGG GCGTATTTGC GTTAATCGCG
CGATAA
 
Protein sequence
MDISAVIFAT HHIRLLPDEG KIPWDEPAFS QRMLENHLSQ DHDWASRRLT VIEQQVTWIT 
RQLPAGARIL DLGCGPGFYT RLLAERGFHC TGVDFSPASI TWARQQAQAA NLNIDYIQQD
IRTYHPTEPF DFIMMTFGEL NAFSAADAQS LISHCAQWLK PDGKLLVEVH TFDEVKRQGM
AQPGWQRCPH GLFLAVPHLL LTENAWDEEA QTSSTQFWAI AENGCTTRFG SQMKAWRDDE
YISLLGDAGF TVLQRPDSHT WPVGETFAGK LFALLAEKAP PAEGIALSKR NNPMDIPRIF
TISESEHRIH NPFTAEKYAT LGHALRMKPG TRILDLGSGS GEMLCTWARD YGVTGTGIDI
SPLFTTQAKQ RAEELGVSEY VHFIHNDAAG YIDEEKYDVA ACVGATWIAG GVAGTIDLLA
KSLKPGGIIL IGEPYWRRIP ATEEIAHACG VSSVADFRPL PELVAFFDQL GYDVVEMVLA
DPQGWDRYEA AKWMTMRRWL EENPDDAFAQ EVRTELTVAP KRHVTWTREY FGWGVFALIA
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