Gene SNSL254_A4827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4827 
Symbol 
ID6484944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp4700890 
End bp4701990 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content55% 
IMG OID642740040 
Productputative permease 
Protein accessionYP_002043718 
Protein GI194445077 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000984202 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAATCA TAAGATATCT GGTGCGGGAG ACGCTCAAAA GCCAGCTGGC GATACTCTTC 
ATCTTACTTT TGATCTTCTT TTGTCAAAAG TTAGTGAGGA TTCTCGGCGC GGCGGTTGAC 
GGCGATATTC CCGCAAATCT GGTGCTCTCG CTTCTGGGGC TGGGCGTACC GGAAATGGCG 
CAGCTCATCC TGCCTTTAAG CCTGTTCCTG GGGCTGCTGA TGACGCTGGG CAAACTGTAT 
ACCGAAAGTG AAATTACGGT CATGCACGCC TGTGGGTTGA GCAAAGCCGT GCTGGTAAAG 
GCCGCCATGG TACTGGCGTT ATTTACCGGT ATCCTTGCGG CGGTTAACGT GATGTGGGCC 
GGCCCCTGGT CGTCAAAACA CCAGGATGAA GTGCTGGCGG AGGCGAAAGC GAACCCCGGT 
ATGGCGGCGT TGGCGCAGGG GCAATTCCAG CAGGCGACCA ACGGCAGCTC GGTGCTGTTT 
ATCGAAAGCG TTGACGGCAG CGACTTCCAC GATGTTTTCC TGGCGCAAAT TCGCCCTAAG 
GGCAATGCTC GTCCTTCTGT GGTAGTGGCC GATTCCGGAC ACCTTACTCA GTTGCGCGAT 
GGTTCCCAGG TTGTCACCTT AAACAAAGGG ACGCGTTTTG AAGGGACGGC GTTGCTACGC 
GATTTTCGCA TCACCGACTT CCAGAACTAT CAGGCGATTA TTGGTCATCA GGCCGTGGCG 
CTGGACCCGA ACGATACCGA CCAGATGGAC ATGCGCACGC TGTGGAATAC CGACAACGAT 
CGCGCTCGCG CCGAGCTGCA CTGGCGTATC ACGTTAGTCT TTACCGTATT TATGATGGCG 
CTGATGGTCG TGCCGCTCAG CGTGGTGAAT CCACGTCAGG GGCGCGTCTT GTCTATGTTG 
CCCGCTATGC TGCTTTATCT GCTGTTCTTC CTGATCCAGA CCTCCATTAA ATCGAATGGC 
GGTAAAGGCA AACTGGATCC GGTTATCTGG ATGTGGGCGG TCAACCTGAT CTATCTGGCG 
TTGGCGATTG GTTTAAACCT GTGGGATACG GTGCCGGTCC GCCGTCTGCG TGCCCGTTTT 
CTGCGTAAAG GAGCGGTATA A
 
Protein sequence
MIIIRYLVRE TLKSQLAILF ILLLIFFCQK LVRILGAAVD GDIPANLVLS LLGLGVPEMA 
QLILPLSLFL GLLMTLGKLY TESEITVMHA CGLSKAVLVK AAMVLALFTG ILAAVNVMWA 
GPWSSKHQDE VLAEAKANPG MAALAQGQFQ QATNGSSVLF IESVDGSDFH DVFLAQIRPK 
GNARPSVVVA DSGHLTQLRD GSQVVTLNKG TRFEGTALLR DFRITDFQNY QAIIGHQAVA 
LDPNDTDQMD MRTLWNTDND RARAELHWRI TLVFTVFMMA LMVVPLSVVN PRQGRVLSML 
PAMLLYLLFF LIQTSIKSNG GKGKLDPVIW MWAVNLIYLA LAIGLNLWDT VPVRRLRARF 
LRKGAV