Gene SNSL254_A4817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4817 
SymbolargF 
ID6483147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4690284 
End bp4691288 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content52% 
IMG OID642740031 
Productornithine carbamoyltransferase subunit I 
Protein accessionYP_002043709 
Protein GI194443068 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0078] Ornithine carbamoyltransferase 
TIGRFAM ID[TIGR00658] ornithine carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACGT TTTACCAAAA ACCTTTTTTA AAGTTACTTG ATTTCACCGC CAGCGAGCTC 
ACTGCTCTGT TGCAGCTTGC CGCCAAACTG AAAGCCGATA AGAAAAACGG TAAAGAAGAA
CAAAAGCTGG TGGGTAAGAA TATTGCGCTC ATCTTCGAAA AAGACTCGAC CCGGACACGA
TGCTCTTTCG AAGTTGCCGC ATACGATCAG GGGGCGCGCG TGACGTACCT GGGTTCCAGC
GGGAGCCAGA TCGGCCATAA AGAGTCCATC AAAGATACTG CCCGCGTCCT GGGCCGGATG
TTTGACGGTA TTCAGTATCG AGGATATGGC CAGGAGATCG TCGAAACGCT GGCTGAATAT
TCCGGTGTGC CGGTATGGAA CGGTTTAACC GATGAGTATC ACCCAACGCA ATTACTGGCG
GATCTGCTCA CCATGCAGGA ACATCTGCCG GGTAAAGCCT TTAACGAGAT GACGTTGGTC
TATGCCGGAG ACGCGCGTAA TAACATGGGT AACTCCATGC TGGAAGCCGC CGCGTTAACA
GGATTGGATC TCCGTCTGGT CGCGCCAAAA GCCTGCTGGC CGCAAGCCGC GTTAGTGGCG
GAGTGCAGCG CCATGGCGAA AAAGAACGGC GGCGCCATCA CCCTGACCGA AGATATCGCC
TCAGGCGTAA AAGGCGCGGA TTTTATCTAT ACCGATGTTT GGGTCTCTAT GGGCGAACTC
AAAGAGAAAT GGGCGGAGCG TATTGCCCTG CTGCGTGATT ATCAGGTCAA CAGCCAGATG
ATGGCGTTAA CCGGCAATCC GCAGGTTAAG TTCCTGCATT GTCTGCCTGC GTTCCATGAT
GACGAAACCA CGCTCGGCAA AAAAATGGCC GAAGAGTACG GTTTACATGG CGGGATGGAA
GTGACCGACG AGGTTTTTGA GTCTGCGGCC AGCATTGTCT TTGATGAAGC GGAAAACCGA
ATGCATACCA TCAAAGCAGT AATGGTAGCG ACGCTGTCTA AATAA
 
Protein sequence
MSTFYQKPFL KLLDFTASEL TALLQLAAKL KADKKNGKEE QKLVGKNIAL IFEKDSTRTR 
CSFEVAAYDQ GARVTYLGSS GSQIGHKESI KDTARVLGRM FDGIQYRGYG QEIVETLAEY
SGVPVWNGLT DEYHPTQLLA DLLTMQEHLP GKAFNEMTLV YAGDARNNMG NSMLEAAALT
GLDLRLVAPK ACWPQAALVA ECSAMAKKNG GAITLTEDIA SGVKGADFIY TDVWVSMGEL
KEKWAERIAL LRDYQVNSQM MALTGNPQVK FLHCLPAFHD DETTLGKKMA EEYGLHGGME
VTDEVFESAA SIVFDEAENR MHTIKAVMVA TLSK