Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4810 |
Symbol | |
ID | 6482514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4684344 |
End bp | 4685747 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642740024 |
Product | C4-dicarboxylate anaerobic carrier |
Protein accession | YP_002043702 |
Protein GI | 194445961 |
COG category | [S] Function unknown |
COG ID | [COG1288] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.334996 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTAAAT TTAAATTTCC CACCGCTTAT ACCATCCTGT TTATTCTTAT TGCCCTAGTC GCGGTGATGA CCTGGATTGT GCCGGCGGGA AAATACCAAA TGGCGATGAA CGCCACGCTG GGAAAAGAGG TGCCGGTGGC GGGAACGTAT GCCCCCGTGG ACGCGCATCC GCAAGGGATT ACCGCTGTTT TACTGGCGCC GATTGACGGC CTCTATAACC ACGAAACCTA CACCGCCGGC GCCATTGACG TCGCGCTGTT TGTCTTGATT ATCGGCGGCT TTCTGGGGGT GGTGAATAAA ACGGGGGCGA TTGATGCCGG TATTGAACGG GTAACTATCA AACTCAACGG CAAAGATGAG TGGATGATCC CCATTCTGAT GGCGCTGTTC GCCGCAGGCG GCACTATCTA TGGCATGGCG GAGGAGTCGT TGCCCTTCTA CACGCTGCTG GTGCCGGTCA TGATGGCGGC CCGCTTCGAT CCGTTAGTGG CGGCGGCAAC CGTACTGCTC GGCGCGGGGA TAGGCACGCT CGGTTCGACC ATTAACCCTT TCGCCACGGT CATTGCCGCC AACGCCGCCG GCATCCCTTT TACTCAGGGA ATGCTGATGC GAGTACTGCT GTTAATTGTC GGCTACGTAC TGTGCGTGTT TTGGGTAATG CGCTATGCGC GCAAAGTCCG CGCCCATCCT GAGCTTTCTA TCGTGGCAGA TAAAATGGAG GAAAACCGCG CCCATTTCCT CGGCAATCGA GCCAATACTC TGCTGGAGTT TACGGCTACC CGGAAATGGG TGCTGCTGAT CTTCGCCGCC TCTTTCGCGG TGATGATTTA CGGCGTGGCG GTTCTCGGCT GGTGGATGGC GGAAATCTCC GGCGTCTTTC TGGCGGCGGC GATTATCGTT GGCGTGATAA CGCGGATGGG CGAGGAAGCG TTCACCAGTA CCTTTATCGA CGGCGCGCGG GATTTGCTCG GCGTGGCGCT AATTATTGGT ATCGCGCGCG GCATTGTGGT GGTCATGGAT AACGGTATGA TTACCCACAC TATTTTGCAC AGCGCGGAAA GTCTGGTTTC CGGCCTCTCT ACCACCATTT TCATAAACGT AACCTATTGG CTGGAAGTAT TGCTCTCCTT CCTGGTGCCC TCCTCTTCCG GTCTTGCCGT ATTGACGATG CCCATTATGG CGCCGTTAGC GGATTTTGCC CACGTACAGC GGGATTTGGT CGTAACCGCC TACCAGTCGG CCTCCGGGAT TGTGAACCTG GTTACGCCCA CCTCCGCCGT GGTCATGGGC GGTCTGGCTA TCGCGCGGGT TCCCTATGTT CGCTATCTGA AATGGGTCGC GCCGCTGTTG CTGATCCTGA CATTGCTGAA TATGGCGGTA CTGAGCATCG GAGCGATGAT GTAA
|
Protein sequence | MGKFKFPTAY TILFILIALV AVMTWIVPAG KYQMAMNATL GKEVPVAGTY APVDAHPQGI TAVLLAPIDG LYNHETYTAG AIDVALFVLI IGGFLGVVNK TGAIDAGIER VTIKLNGKDE WMIPILMALF AAGGTIYGMA EESLPFYTLL VPVMMAARFD PLVAAATVLL GAGIGTLGST INPFATVIAA NAAGIPFTQG MLMRVLLLIV GYVLCVFWVM RYARKVRAHP ELSIVADKME ENRAHFLGNR ANTLLEFTAT RKWVLLIFAA SFAVMIYGVA VLGWWMAEIS GVFLAAAIIV GVITRMGEEA FTSTFIDGAR DLLGVALIIG IARGIVVVMD NGMITHTILH SAESLVSGLS TTIFINVTYW LEVLLSFLVP SSSGLAVLTM PIMAPLADFA HVQRDLVVTA YQSASGIVNL VTPTSAVVMG GLAIARVPYV RYLKWVAPLL LILTLLNMAV LSIGAMM
|
| |