| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4757 |
|---|
| Symbol | |
|---|
| ID | 6485590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 4633109 |
|---|
| End bp | 4633729 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642739972 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_002043650 |
|---|
| Protein GI | 194445028 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000289999 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 95 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCC CGACTTTTGA CACTATTGAA GCGCAAGCGA GCTACGGCAT TGGTTTGCAG
GTAGGGCAGC AGCTCAGCGA ATCCGGTCTT GAAGGGCTGT TGCCTGAAGC GCTGGTTGCA
GGCATTGCTG ATGCGCTGGA AGGTAAACAC CCGGCGGTTC CTGTTGATGT GGTGCATCGT
GCGCTGCGTG AAATTCATGA GCGTGCGGAC GCGGTGCGTC GTGAGCGTTT CAAAGCGATG
GCGGCCGAAG GCGTGAAATA CCTGGAAGAA AACCGCGAAA AAGACGGTGT GAACAGTACT
GAATCTGGTT TACAGTTCCG CGTTCTGACG CAGGGCGAAG GCGCGATTCC GGCGCGTACC
GACCGCGTAC GCGTGCATTA CACCGGTAAG CTTATTGATG GCACCGTATT TGACAGCTCC
GTCGCGCGCG GCGAACCGGC TGAATTCCCG GTAAATGGCG TGATCGCTGG CTGGATTGAA
GCGCTGACTC TGATGCCGGT AGGTTCCAAA TGGGAACTGA CTATCCCACA GGAGCTGGCC
TATGGCGAGC GTGGGGCCGG GGCATCTATT CCGCCATTCA GCACCCTGGT GTTTGAGGTG
GAACTGCTGG AAATTCTGTA A
|
|---|
| Protein sequence | MATPTFDTIE AQASYGIGLQ VGQQLSESGL EGLLPEALVA GIADALEGKH PAVPVDVVHR
ALREIHERAD AVRRERFKAM AAEGVKYLEE NREKDGVNST ESGLQFRVLT QGEGAIPART
DRVRVHYTGK LIDGTVFDSS VARGEPAEFP VNGVIAGWIE ALTLMPVGSK WELTIPQELA
YGERGAGASI PPFSTLVFEV ELLEIL
|
|---|
| |