Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4691 |
Symbol | groEL |
ID | 6483212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4574520 |
End bp | 4576166 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642739909 |
Product | chaperonin GroEL |
Protein accession | YP_002043590 |
Protein GI | 194443904 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCTA AAGACGTAAA ATTCGGTAAC GACGCTCGTG TGAAAATGCT GCGCGGCGTA AACGTACTGG CAGATGCAGT GAAAGTAACC CTCGGTCCGA AAGGCCGTAA CGTGGTTCTG GATAAATCTT TCGGTGCGCC GACTATCACT AAAGATGGTG TTTCCGTAGC GCGTGAAATC GAACTGGAAG ACAAGTTTGA AAACATGGGC GCGCAGATGG TGAAAGAAGT TGCCTCTAAA GCGAACGACG CTGCAGGCGA CGGCACCACC ACCGCGACCG TACTGGCGCA GTCCATTATT ACCGAAGGCC TGAAAGCCGT TGCTGCGGGC ATGAACCCGA TGGACCTGAA ACGTGGTATC GACAAAGCGG TTGCTGCGGC GGTTGAAGAG CTGAAGGCGC TGTCCGTACC GTGCTCCGAC TCTAAAGCGA TTGCTCAGGT AGGTACTATC TCCGCTAACT CCGACGAAAC CGTAGGTAAA CTGATCGCGG AAGCGATGGA TAAAGTCGGT AAAGAAGGCG TCATCACCGT TGAAGACGGT ACCGGTCTGC AGGACGAACT GGACGTGGTT GAAGGTATGC AGTTTGACCG CGGCTACCTG TCTCCTTACT TCATCAACAA GCCGGAAACT GGCGCAGTAG AACTGGAAAG CCCGTTCATC CTGCTGGCTG ATAAGAAAAT CTCCAACATC CGCGAAATGC TGCCGGTTCT GGAAGCCGTT GCAAAAGCAG GCAAACCGCT GCTGATCATC GCTGAAGATG TTGAAGGCGA AGCGCTGGCT ACCCTGGTGG TGAACACCAT GCGTGGCATC GTGAAAGTGG CTGCGGTTAA GGCACCTGGC TTCGGCGATC GTCGTAAGGC GATGCTGCAG GATATCGCTA CCCTGACCGG CGGTACCGTA ATCTCTGAAG AGATCGGTAT GGAGCTGGAA AAAGCAACCC TGGAAGACCT GGGTCAGGCG AAACGTGTTG TGATCAACAA AGACACCACC ACCATCATCG ATGGCGTGGG TGAAGAAGCT GCCATCCAGG GCCGTGTTGC TCAGATCCGT CAGCAGATTG AAGAAGCGAC CTCCGACTAC GATCGTGAAA AACTGCAGGA GCGCGTAGCG AAACTGGCAG GCGGCGTTGC GGTAATCAAA GTTGGCGCTG CGACCGAAGT TGAAATGAAA GAGAAGAAAG CCCGCGTTGA AGATGCCCTG CACGCGACCC GTGCTGCGGT AGAAGAAGGC GTGGTTGCTG GTGGTGGCGT TGCGCTGATC CGCGTTGCTT CTAAAATTGC TGACCTGAAA GGCCAGAACG AAGACCAGAA CGTGGGTATC AAAGTTGCGC TGCGCGCAAT GGAAGCTCCG CTGCGTCAGA TCGTGCTGAA CTGCGGCGAA GAGCCGTCTG TTGTCGCTAA CACCGTTAAA GGCGGCGACG GTAACTACGG TTACAACGCA GCAACTGAAG AATACGGCAA CATGATCGAT ATGGGTATCC TGGACCCAAC CAAAGTTACC CGTTCTGCGC TGCAGTACGC TGCTTCTGTG GCTGGTCTGA TGATCACTAC CGAGTGCATG GTGACCGACC TGCCGAAAAG CGATGCTCCT GATTTAGGCG CTGCTGGCGG CATGGGTGGT ATGGGTGGTA TGGGCGGAAT GATGTAA
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Protein sequence | MAAKDVKFGN DARVKMLRGV NVLADAVKVT LGPKGRNVVL DKSFGAPTIT KDGVSVAREI ELEDKFENMG AQMVKEVASK ANDAAGDGTT TATVLAQSII TEGLKAVAAG MNPMDLKRGI DKAVAAAVEE LKALSVPCSD SKAIAQVGTI SANSDETVGK LIAEAMDKVG KEGVITVEDG TGLQDELDVV EGMQFDRGYL SPYFINKPET GAVELESPFI LLADKKISNI REMLPVLEAV AKAGKPLLII AEDVEGEALA TLVVNTMRGI VKVAAVKAPG FGDRRKAMLQ DIATLTGGTV ISEEIGMELE KATLEDLGQA KRVVINKDTT TIIDGVGEEA AIQGRVAQIR QQIEEATSDY DREKLQERVA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG VVAGGGVALI RVASKIADLK GQNEDQNVGI KVALRAMEAP LRQIVLNCGE EPSVVANTVK GGDGNYGYNA ATEEYGNMID MGILDPTKVT RSALQYAASV AGLMITTECM VTDLPKSDAP DLGAAGGMGG MGGMGGMM
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