Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4645 |
Symbol | |
ID | 6485661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4534938 |
End bp | 4536368 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642739867 |
Product | melibiose:sodium symporter |
Protein accession | YP_002043549 |
Protein GI | 194444608 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.752392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCT CTCTGACAAC AAAGCTGAGT TACGGGTTCG GTGCGTTTGG TAAGGATTTC GCCATCGGCA TTGTGTATAT GTACCTGATG TATTACTACA CCGATGTGGT GGGACTTTCG GTCGGCCTCG TCGGCACTCT CTTTCTGGTC GCGCGAATCT GGGATGCGAT AAACGATCCC ATCATGGGCT GGATTGTCAA CGCCACGCGT TCGCGGTGGG GGAAATTTAA GCCGTGGATA TTGATCGGCA CCTTAACCAA TTCGCTGGTG CTTTTCCTGC TGTTCAGCGC CCATCTTTTT GAGGGAACCG CGCAGGTTGT ATTTGTCTGC GTAACCTACA TCCTGTGGGG CATGACGTAT ACCATTATGG ATATCCCATT TTGGTCGCTG GTGCCGACCA TTACGCTTGA TAAGCGAGAA CGCGAACAAC TGGTGCCGTT CCCGCGTTTC TTCGCCAGTC TGGCTGGCTT CGTCACTGCC GGTATAACGC TGCCGTTTGT GAACTACGTT GGCGGAGCGG ATCGTGGGTT CGGCTTTCAG ATGTTTACGC TGGTACTGAT TGCGTTCTTT ATCGCCTCGA CTATCGTGAC ATTACGCAAC GTCCATGAGG TGTACTCCTC CGACAACGGT GTAACGGCGG GCCGCCCACA TCTGACGTTA AAAACGATCG TTGGATTGAT ATACAAAAAC GATCAGCTCT CTTGCCTGTT GGGAATGGCG CTGGCGTATA ACATTGCCTC CAATATTATC AATGGCTTTG CGATCTACTA CTTCACCTAT GTGATTGGCG ATGCCGATCT TTTTCCCTAT TACCTTTCTT ACGCCGGCGC GGCGAATCTG CTGACGCTGA TTGTCTTCCC CCGGCTGGTG AAAATGTTAT CGCGGCGGAT ATTGTGGGCG GGCGCCTCCG TGATGCCCGT TCTGAGTTGC GCAGGGCTCT TCGCGATGGC GTTGGCGGAT GTCCATAATG CCGCTTTAAT CGTGGCGGCG GGTATTTTCC TGAATATCGG GACCGCGCTC TTTTGGGTGC TTCAGGTGAT CATGGTGGCG GATACGGTCG ATTATGGGGA ATTTAAGCTC AATATTCGCT GCGAGAGTAT CGCTTATTCC GTACAGACGA TGGTCGTGAA GGGCGGCTCG GCGTTTGCGG CGTTCTTTAT CGCTCTGGTG CTGGGGCTGA TTGGCTACGC GCCGAACGTG GCGCAGTCTG CGCAAACCCT GCAGGGGATG CAGTTTATTA TGGTTGTCCT GCCGGTACTG TTTTTCATGA TGACGTTGGT TCTCTACTTC CGCTACTACC GTTTGAACGG CGATATGCTG CGCAAAATTC AGATCCACCT GCTGGATAAA TACCGGAAAA CGCCGCCATT CGTCGAACAG CCGGATAGCC CGGCGATTTC TGTGGTAGCG ACCAGCGATG TAAAAGCGTG A
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Protein sequence | MSISLTTKLS YGFGAFGKDF AIGIVYMYLM YYYTDVVGLS VGLVGTLFLV ARIWDAINDP IMGWIVNATR SRWGKFKPWI LIGTLTNSLV LFLLFSAHLF EGTAQVVFVC VTYILWGMTY TIMDIPFWSL VPTITLDKRE REQLVPFPRF FASLAGFVTA GITLPFVNYV GGADRGFGFQ MFTLVLIAFF IASTIVTLRN VHEVYSSDNG VTAGRPHLTL KTIVGLIYKN DQLSCLLGMA LAYNIASNII NGFAIYYFTY VIGDADLFPY YLSYAGAANL LTLIVFPRLV KMLSRRILWA GASVMPVLSC AGLFAMALAD VHNAALIVAA GIFLNIGTAL FWVLQVIMVA DTVDYGEFKL NIRCESIAYS VQTMVVKGGS AFAAFFIALV LGLIGYAPNV AQSAQTLQGM QFIMVVLPVL FFMMTLVLYF RYYRLNGDML RKIQIHLLDK YRKTPPFVEQ PDSPAISVVA TSDVKA
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