Gene SNSL254_A4616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4616 
Symbol 
ID6482354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp4500554 
End bp4501441 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content56% 
IMG OID642739840 
ProductLysR family regulatory protein 
Protein accessionYP_002043522 
Protein GI194446196 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCA GAACGCTGCG TTATTTTGTC GAGGTGGTGC GCCAGCAAAG TTTCACCCGC 
GCAGCGGAGA AGTTATTTGT CACCCAGCCC ACCATTAGCA AGATGCTGAA AAATCTTGAA 
GATGAGCTTA ACTGTACGCT ACTGATCCGC GACGGACGTA AGTTATTGCT GACCGATACC 
GGACGCGTGG TGTTTGAACG CGGTCTGGCG ATCCTCGCTG AGTTTCGCCA GTTAGAGGCT 
GAGTTGAGCG ATATTAACCA TCTCAATAAG GGCGTGCTGC GGCTGGGTAT TCCCCCGATG 
GTCGGCATGT TGATGGCCGG GCCAATCAGT TTGTTTCGAC AACGCTACCC TGGCGTTGAA 
CTCAAAATTT CGGAGTTTGG CGGCCTGACG GTACAGCAGG CGGTAATGAA TGGCGAGCTG 
GATGTTGCGA TGACCGCGCT CCCGGTGGAA GAAGCGAGCG GGCTGACGAC GTTATCGCTG 
TTCAGTCATC CGCTGTGCGT GCTGGTTCCC CGTTCCGGTC AGTGGACAAC CTGCGACTCC 
ATCGCGCCTG AAGCTCTGGC GGAGCATCCT CTTCTTATCT ATAACGAAGA CTTTGCCCTG 
AGCCGCCAGT TGATGACCTT ATTTAGCCAG CATGACGTAA AACCACGGAT TGCCGTGCGC 
AGCGGGCAAT GGGATTTTCT CGCCGCCATG GTGCAAGCGG GCGTCGGCAT CGCCATTTTG 
CCGGAGCCGA TTTGTCAGCG TCTGGATAAG GCCACGCTGC GCTGGCTACC GCTGGAAAGC 
GATCTCCGCT GGCAGTTGGG CATGATTTGG CGAGAGGGCG TGTATCTGTC GCACAGCGCC 
CGGGCATGGT TAACCTGTTG CGAAGGGTTT TGGCTGAAAC AACCGTAA
 
Protein sequence
MDIRTLRYFV EVVRQQSFTR AAEKLFVTQP TISKMLKNLE DELNCTLLIR DGRKLLLTDT 
GRVVFERGLA ILAEFRQLEA ELSDINHLNK GVLRLGIPPM VGMLMAGPIS LFRQRYPGVE 
LKISEFGGLT VQQAVMNGEL DVAMTALPVE EASGLTTLSL FSHPLCVLVP RSGQWTTCDS 
IAPEALAEHP LLIYNEDFAL SRQLMTLFSQ HDVKPRIAVR SGQWDFLAAM VQAGVGIAIL 
PEPICQRLDK ATLRWLPLES DLRWQLGMIW REGVYLSHSA RAWLTCCEGF WLKQP