| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4611 |
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| Symbol | soxR |
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| ID | 6484929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 4495548 |
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| End bp | 4496006 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642739835 |
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| Product | redox-sensitive transcriptional activator SoxR |
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| Protein accession | YP_002043517 |
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| Protein GI | 194445383 |
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| COG category | [K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR01950] redox-sensitive transcriptional activator SoxR |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0111034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.796254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAAAA AATCTCCCCG TTTAAAAGCC TTACTGACGC CGGGGGAAGT TGCGAAACGT
AGCGGTGTTG CTGTGTCCGC CCTGCACTTC TATGAAAGCA AAGGGCTAAT TACCAGTATC
CGTAATAGCG GTAACCAACG GCGATACAAG CGTGACGTGT TGCGTTATGT CGCGATTATC
AAGATCGCCC AGCGTATCGG CATCCCGCTG GCAACTATCG GCGACGCGTT TGGTATCTTG
CCGGAAGGGC ATACGTTAAG CGCGAAAGAG TGGAAGCAGC TCTCATCGCA GTGGCGCGAA
GAGTTAGACC GACGTATTCA TACGCTGGTG GCGTTGCGCG ATGAGCTGGA CGGTTGTATC
GGCTGCGGCT GTTTATCGCG TAGCGACTGT CCGCTGCGAA ATCCAGGCGA CAGGCTTGGC
GAACACGGGA CGGGCGCCCG GCTGCTTGAA GATGATTAA
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| Protein sequence | MEKKSPRLKA LLTPGEVAKR SGVAVSALHF YESKGLITSI RNSGNQRRYK RDVLRYVAII
KIAQRIGIPL ATIGDAFGIL PEGHTLSAKE WKQLSSQWRE ELDRRIHTLV ALRDELDGCI
GCGCLSRSDC PLRNPGDRLG EHGTGARLLE DD
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