Gene SNSL254_A4563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4563 
Symbolpgi 
ID6484601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4431329 
End bp4432978 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content53% 
IMG OID642739789 
Productglucose-6-phosphate isomerase 
Protein accessionYP_002043471 
Protein GI194443805 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.606184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.0348478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA TCAATCCAAC GCAGACTTCT GCCTGGCAGG CGCTCCAGAA ACACTACGAT 
GAAATGAAAG ACGTTACGAT CGCTGAGCTT TTCGCGAACG ATAGCGACCG TTTCGCTAAA
TTTTCCGCGA CGTTTGACGA TCTGATGCTG GTGGATTTCT CCAAAAACCG CATCACCGAA
GAGACGCTGG CAAAATTACA GGATCTGGCG AAAGAGACCG ATCTGGCCGG CGCGATTAAA
TCCATGTTCT CCGGCGAGAA GATTAACCGC ACCGAAGACC GCGCCGTGCT GCACGTGGCG
CTGCGTAACC GTAGCAATAC GCCGATCATC GTGGACGGCA AAGATGTGAT GCCGGAAGTG
AACGCCGTGC TTGAGAAGAT GAAAACTTTC TCGCAAGCGA TTATCTCCGG TCAGTGGAAA
GGCTACACCG GTAAGGCCAT CACCGACGTG GTGAACATCG GTATCGGCGG TTCCGACCTC
GGCCCGTTCA TGGTGACCGA AGCGCTGCGT CCGTATAAAA ATCATCTGAC TATGCACTTC
GTCTCTAACG TCGATGGTAC CCACATCGCT GAAGTGCTGA AGAAAGTGAA CCCTGAAACC
ACGCTGTTCC TGGTCGCGTC GAAAACTTTC ACCACCCAGG AAACCATGAC CAACGCCCAC
AGCGCGCGCG ACTGGTTCCT GAAAACTGCA GGCGATGAAA AACACGTGGC GAAACACTTT
GCTGCGCTCT CCACCAACGC CAAAGCGGTC GGCGAATTTG GTATCGACAC GGCCAATATG
TTCGAGTTCT GGGACTGGGT CGGTGGTCGT TACTCGCTGT GGTCTGCCAT CGGGCTGTCC
ATTATTCTGT CCGTCGGTTT CGACAACTTT GTCGAGCTGC TTTCCGGCGC GCACGCGATG
GACAAGCATT TCTCCACCAC TCCGGCGGAG AAAAACCTAC CCATTCTGCT GGCGTTGATT
GGCATCTGGT ACAACAATTT CTTCGGCGCG GAAACCGAAG CCATTCTGCC GTATGACCAG
TATATGCACC GTTTCGCCGC CTACTTCCAG CAGGGTAACA TGGAATCCAA CGGTAAATAC
GTTGACCGTA ACGGCAACGC CGTGGATTAC CAGACAGGCC CAATTATCTG GGGCGAACCA
GGCACCAACG GTCAGCACGC GTTTTATCAA TTGATTCACC AGGGTACTAA AATGGTGCCG
TGTGATTTTA TCGCCCCGGC TATCACCCAT AACCCGCTAT CCGATCATCA TCAGAAGCTG
CTGTCTAACT TCTTCGCGCA GACCGAAGCG CTGGCGTTTG GTAAATCCCG CGAGGTGGTT
GAGCAGGAAT ATCGCGATCA GGGTAAAGAT CCGGCGCAGC TTGAACACGT TGTGCCATTC
AAAGTGTTTG AAGGCAACCG CCCGACCAAC TCTATCCTGC TGCGTGAAAT TACACCGTTC
AGCCTGGGCG CGCTGATTGC GCTGTATGAG CATAAAATCT TTACGCAGGG CGCCATCCTG
AACATCTTTA CTTTCGACCA GTGGGGCGTT GAGTTGGGTA AACAGTTGGC TAACCGTATT
CTGCCGGAGC TGGGCGATGA TAAAGCTATT TCGTCCCATG ATAGCTCTAC TAACGGTCTG
ATTAACCGTT ATAAAGCCTG GCGCGCCTGA
 
Protein sequence
MKNINPTQTS AWQALQKHYD EMKDVTIAEL FANDSDRFAK FSATFDDLML VDFSKNRITE 
ETLAKLQDLA KETDLAGAIK SMFSGEKINR TEDRAVLHVA LRNRSNTPII VDGKDVMPEV
NAVLEKMKTF SQAIISGQWK GYTGKAITDV VNIGIGGSDL GPFMVTEALR PYKNHLTMHF
VSNVDGTHIA EVLKKVNPET TLFLVASKTF TTQETMTNAH SARDWFLKTA GDEKHVAKHF
AALSTNAKAV GEFGIDTANM FEFWDWVGGR YSLWSAIGLS IILSVGFDNF VELLSGAHAM
DKHFSTTPAE KNLPILLALI GIWYNNFFGA ETEAILPYDQ YMHRFAAYFQ QGNMESNGKY
VDRNGNAVDY QTGPIIWGEP GTNGQHAFYQ LIHQGTKMVP CDFIAPAITH NPLSDHHQKL
LSNFFAQTEA LAFGKSREVV EQEYRDQGKD PAQLEHVVPF KVFEGNRPTN SILLREITPF
SLGALIALYE HKIFTQGAIL NIFTFDQWGV ELGKQLANRI LPELGDDKAI SSHDSSTNGL
INRYKAWRA