Gene SNSL254_A4506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4506 
Symbol 
ID6485848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4378573 
End bp4379970 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content55% 
IMG OID642739735 
Productsensor protein ZraS 
Protein accessionYP_002043421 
Protein GI194446308 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.0449014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTTTA TACGATTACA TAAAGATGCC GCTGCAACGT GGTTGAGTCG GCTGTTACCT 
GCGGCGATCT TCATTCTGGT GGGGCTATTT TCCATTATGG TCATTCGCGA CTATGGCCGT
GAGAGCGCTG CCGCCAGGCA GACGCTGCTG GAAAAGGGAA ATGTACTCAT TCGCGCTCTG
GAGTCCGGCA CGCGAGTAGG TATGGGAATG CGGATGCATC ACGCGCAGCA GCAGACATTG
CTGGAAGAGA TGGCGGGTCA GCCAGGCGTG TTGTGGTTCG CTGTAACGGA TGCGCAGGGG
GTAATCATCA CTCATAGCAA CCCTGGCATG GTGGGCAAAT CGCTCTATTC CCTATCTGAA
ATGCATCAAC TAAACCCCGG GCCGCAGGAG CGTTGGCGGC GTGTCGACGT TGCTGCTAAC
GGCGAGACGG TGCCTGCGCT GGAAATTTAC CGTCAGTTCC AGCCGCTTTT CGGTATGAGA
GGTCACGGTA TGAGGGGGCA CGGCATGGCG CGTAGCGCCA ATGACGACGA ACCAGCGAAA
CAAACTATTT TTATTGCCTT TGACGCCAGC GAGCTGGCCG CGACACAGGC AAGGGAGTGG
CGTAATACGC TGATTGTTTT GTCTGCGTTA GCGGCGGTGC TGTTGGCAAC GTTACTGGCG
TTTTTTTGGC ATCAGCGTTA TCAGCGCTCG CACAGAGAAC TGCTTGATGC AATGAAGCGT
AAAGAAAAGC TGGTGGCGAT GGGGCATCTG GCGGCGGGCG TCGCGCACGA AATTCGTAAC
CCGCTCTCGT CCATCAAAGG GCTGGCGAAA TACTTTGCCG AGCGCACGCC AGCCGGCGGC
GAGTCGCATG AACTGGCGCA GGTGATGGCC AAAGAGGCCG ACCGTTTGAA CCGGGTGGTA
AGCGAATTGC TCGAACTGGT AAAGCCCGCG CATCTGACGC TCCAGGCGGT TAACCTCAAT
GATATTATTA CTCACTCCCT GAATCTGGTC AGTCAGGATG CCCAAAGCAG AGAGATTCAG
TTGAGATTCA CGGCGAATGA GACGCTTAAG CGTATTCAGG CTGACCCGGA CAGGCTGACT
CAGGTGCTGT TGAATCTGTA CCTGAACGCT ATTCATGCGA TTGGCCGCCA GGGAACGATT
ACCGTAGAGG CAAAAGAAAG TGGGACCGAC CGCGTTATCA TCACTGTTAC CGATAGCGGG
AAAGGGATCG CCCCGGATCA GCTGGAGGCG ATTTTTACGC CTTATTTTAC GACCAAAGCT
GACGGGACAG GCCTGGGGCT GGCTGTGGTG CAAAATATCA TCGAACAGCA TGGCGGCGCG
ATTAAGGTGA AAAGTATTGA GGGTAAAGGC GCGGTCTTTA CTATCTGGTT GCCAGTGATA
GCGAGACAAC AGGATTAA
 
Protein sequence
MSFIRLHKDA AATWLSRLLP AAIFILVGLF SIMVIRDYGR ESAAARQTLL EKGNVLIRAL 
ESGTRVGMGM RMHHAQQQTL LEEMAGQPGV LWFAVTDAQG VIITHSNPGM VGKSLYSLSE
MHQLNPGPQE RWRRVDVAAN GETVPALEIY RQFQPLFGMR GHGMRGHGMA RSANDDEPAK
QTIFIAFDAS ELAATQAREW RNTLIVLSAL AAVLLATLLA FFWHQRYQRS HRELLDAMKR
KEKLVAMGHL AAGVAHEIRN PLSSIKGLAK YFAERTPAGG ESHELAQVMA KEADRLNRVV
SELLELVKPA HLTLQAVNLN DIITHSLNLV SQDAQSREIQ LRFTANETLK RIQADPDRLT
QVLLNLYLNA IHAIGRQGTI TVEAKESGTD RVIITVTDSG KGIAPDQLEA IFTPYFTTKA
DGTGLGLAVV QNIIEQHGGA IKVKSIEGKG AVFTIWLPVI ARQQD