Gene SNSL254_A4479 details

Gene Information

• Locus tag: SNSL254_A4479
• Symbol: secE
• ID: 6485183
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Newport str. SL254
• Kingdom: Bacteria
• Replicon accession: NC_011080
• Strand: +
• Start bp: 4353471
• End bp: 4353854
• Gene Length: 384 bp
• Protein Length: 127 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 642739713
• Product: preprotein translocase subunit SecE
• Protein accession: YP_002043399
• Protein GI: 194444349
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0690] Preprotein translocase subunit SecE
• TIGRFAM ID: [TIGR00964] preprotein translocase, SecE subunit, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000837942
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.00000000000000405738
• Fosmid Hitchhiker: No
• Fosmid clonability: decreased coverage

Sequence

Gene sequence

ATGAGTGCGA ATACCGAAGC TCAAGGGAGC GGGCGCGGCC TGGAAGCGAT GAAGTGGATA 
GTTGTTGCCA TATTGCTGAT CGTCGCAATC GTCGGCAACT ACCTCTATCG CGACATGATG 
CTGCCGCTGC GTGCGCTGGC CGTAGTAATT CTGATTGCTG CAGCGGGTGG TGTCGCGCTG 
TTGACGACAA AAGGTAAAGC AACCGTTGCT TTTGCCCGTG AAGCGAGAAC CGAAGTCCGT 
AAGGTCATTT GGCCGACTCG CCAGGAAACG CTGCACACCA CGCTGATCGT CGCTGCGGTT 
ACCGCAGTTA TGTCACTGAT CCTGTGGGGA CTGGATGGTA TTCTGGTTCG CCTGGTATCC 
TTTATCACTG GCCTGAGGTT CTGA 

 

Protein sequence

MSANTEAQGS GRGLEAMKWI VVAILLIVAI VGNYLYRDMM LPLRALAVVI LIAAAGGVAL 
LTTKGKATVA FAREARTEVR KVIWPTRQET LHTTLIVAAV TAVMSLILWG LDGILVRLVS 
FITGLRF