Gene SNSL254_A4422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4422 
SymbolhslV 
ID6484110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4292106 
End bp4292636 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content54% 
IMG OID642739661 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_002043355 
Protein GI194446683 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAACAA TAGTAAGCGT ACGCCGTAAC GGCCACGTGG TAATCGCCGG TGATGGTCAG 
GCCACACTGG GTAACACAGT AATGAAAGGC AACGTGAAGA AAGTCCGCCG CCTCTACAAC
GACAAGGTCA TTGCGGGCTT TGCGGGCGGT ACTGCGGATG CATTCACGCT GTTCGAGCTG
TTTGAACGTA AACTGGAAAT GCATCAGGGG CACCTGGTCA AAGCCGCCGT TGAACTGGCG
AAAGACTGGC GTACCGACCG TATGCTACGC AAACTGGAAG CGTTGCTGGC CGTCGCGGAT
GAAACCGCCT CGCTCATCAT CACGGGTAAC GGCGATGTCG TGCAACCTGA AAACGATTTA
ATTGCTATCG GCTCCGGCGG TCCTTATGCC CAGGCTGCCG CTCGCGCTCT GTTGGAAAAT
ACCGAGCTCG GCGCGCGCGA AATTGCTGAA AAGGCGTTGG ATATTGCAGG CGATATCTGC
ATTTACACCA ACCATTTCCA CACCATTGAA GAATTGACCG CCAAAGCGTA A
 
Protein sequence
MTTIVSVRRN GHVVIAGDGQ ATLGNTVMKG NVKKVRRLYN DKVIAGFAGG TADAFTLFEL 
FERKLEMHQG HLVKAAVELA KDWRTDRMLR KLEALLAVAD ETASLIITGN GDVVQPENDL
IAIGSGGPYA QAAARALLEN TELGAREIAE KALDIAGDIC IYTNHFHTIE ELTAKA