Gene SNSL254_A4420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4420 
SymbolmenA 
ID6485753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4289769 
End bp4290710 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content55% 
IMG OID642739659 
Product1,4-dihydroxy-2-naphthoate octaprenyltransferase 
Protein accessionYP_002043353 
Protein GI194443749 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGCTAA ATATGACTGA ACAACAACAA ATTAGCCGCA CCCAGGCCTG GCTGGAAAGC 
TTACGACCCA AAACCTTACC CCTCGCCTTC GCAGCGATTA TCGTCGGTAC GGCCCTGGCA
TGGTGGCAAG GCTATTTCGA TCCTCTGGTC GCGCTGCTGG CCCTTATCAC CGCCGGGCTG
CTGCAAATTT TATCCAACCT CGCCAACGAT TATGGCGACG CTGTCAAAGG CAGCGATAAA
CCGGATCGCA TCGGGCCGCT GCGGGGGATG CAAAAAGGCG TCATCACCCG GCAGGAGATG
AAGCGGGCGT TAATCATTAC CGTCGTGCTG ATCTGTATCT CCGGACTGGC GCTGGTGGCG
GTCGCGTGCC ATACGTTAAC CGATTTTATC GGCTTCCTGA TTTTGGGCGG GCTGTCGATT
ATCGCCGCCA TCACCTACAC CGTGGGTAAT CGGCCCTACG GCTATATCGG GCTGGGTGAT
ATCTCTGTTC TGGTATTCTT TGGCTGGCTA AGTGTCATGG GGAGCTGGTA TCTCCAGGCG
CATACGCTGA TTCCGGCGCT GATTCTCCCG GCCACCGCCT GCGGTTTACT GGCGACGGCA
GTGCTGAATA TTAATAACCT GCGCGATATT AATAGCGACA GAGAGAACGG CAAAAACACC
CTTGTAGTAC GACTGGGCGA TGTCAACGCG CGTCGTTATC ACGCCTGCCT GTTGCTAGGC
GCGCTGCTCT GTCTGGCGCT GTTTAATCTG CTCTCGCTAC ACAGCCCGTG GGGATGGTTG
TTTATTCTGG CCGCGCCCTT GCTCATTAAA CAAGCGCGCT ACGTAATGCG CGAAAGGGAG
CCTGCGGCAA TGCGCCCGAT GCTTGAACGT ACCGTTAAAG GCGCGTTGTT AACCAACCTG
TTATTTGTGA TTGGGATACT CTTAAGTCAG TGGGCCGTTT AA
 
Protein sequence
MALNMTEQQQ ISRTQAWLES LRPKTLPLAF AAIIVGTALA WWQGYFDPLV ALLALITAGL 
LQILSNLAND YGDAVKGSDK PDRIGPLRGM QKGVITRQEM KRALIITVVL ICISGLALVA
VACHTLTDFI GFLILGGLSI IAAITYTVGN RPYGYIGLGD ISVLVFFGWL SVMGSWYLQA
HTLIPALILP ATACGLLATA VLNINNLRDI NSDRENGKNT LVVRLGDVNA RRYHACLLLG
ALLCLALFNL LSLHSPWGWL FILAAPLLIK QARYVMRERE PAAMRPMLER TVKGALLTNL
LFVIGILLSQ WAV