Gene SNSL254_A4345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4345 
SymbolcpxA 
ID6486849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4229014 
End bp4230387 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content57% 
IMG OID642739589 
Producttwo-component sensor protein 
Protein accessionYP_002043283 
Protein GI194444500 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value3.60495e-07 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATAGGAA GTTTAACCGC GCGCATCTTC GCCATCTTCT GGTTGACGCT GGCGCTGGTG 
CTAATGCTGG TACTGATGTT GCCCAAGCTC GATTCACGCC AGATGACCGA GCTGCTGGAC
AGCGAACAGC GCCAGGGATT GATGATAGAG CAACATGTAG AAGCTGAACT TGCGAACGAT
CCGCCCAACG ACCTGATGTG GTGGCGTCGC CTGTTCCGCG CGATCGATAA GTGGGCGCCG
CCTGGACAGC GGTTATTACT GGTGACCTCT GAAGGACGCG TGATCGGCGC TGAACGCAGC
GAAATGCAGA TCATTCGTAA CTTCATTGGT CAGGCGGATA ACGCCGATCA TCCGCAGAAG
AAAAAATATG GCCGCGTAGA GATGGTGGGG CCGTTCTCCG TTCGTGACGG AGAGGATAAT
TACCAGCTTT ACCTGATTCG ACCGGCCAGC AGTTCGCAAT CCGATTTTAT TAATCTGCTG
TTTGACCGCC CGCTCCTGTT GCTCATTGTC ACGATGCTGG TCAGTTCGCC GCTCTTGCTA
TGGCTGGCAT GGAGTCTGGC GAAACCGGCG CGTAAGTTGA AAAACGCGGC TGATGAAGTG
GCGCAAGGCA ACCTGCGTCA GCATCCGGAG CTGGAGGCGG GTCCGCAGGA GTTCCTCGCC
GCTGGCGCCA GTTTTAACCA GATGGTGACG GCGCTGGAAC GGATGATGAC CTCGCAGCAG
CGTTTGCTGT CAGACATCTC CCATGAGCTG CGAACGCCCC TTACGCGCCT GCAACTGGGT
ACCGCGCTGC TGCGTCGTCG TGGCGGCGAA AGCAAAGAGC TGGAGCGTAT TGAAACCGAA
GCGCAGCGTC TGGACAGCAT GATCAATGAC CTGCTGGTGA TGTCGCGTAA CCAACAGAAA
AATGCGCTGG TCAGCGAAAC GATGAAAGCC AATCAGCTAT GGGGCGAAGT GCTGGATAAC
GCCGCCTTTG AAGCCGAACA GATGGGCAAG TCGTTAACGG TAAATTATCC GCCGGGGCCG
TGGCCGCTCT ATGGCAACCC AAACGCGCTG GAAAGCGCGC TGGAAAATAT TGTTCGTAAT
GCGCTGCGCT ATTCACATAC GAAGATTGAA GTCGGCTTCT CGGTGGATAA AGACGGTATT
ACGATCACGG TCGATGACGA CGGGCCGGGC GTCAGCCCTG AAGACCGCGA GCAGATCTTC
CGTCCGTTCT ATCGCACTGA TGAGGCGCGC GACCGTGAAT CCGGTGGTAC TGGCCTGGGG
CTGGCGATTG TCGAAAGCGC CATGCAGCAG CACCGCGGCT GGGTGAAGGC TGACGATAGC
CCGCTGGGTG GGTTGCGGCT CACGCTGTGG CTACCGCTGT ACAAGCGAAC CTAA
 
Protein sequence
MIGSLTARIF AIFWLTLALV LMLVLMLPKL DSRQMTELLD SEQRQGLMIE QHVEAELAND 
PPNDLMWWRR LFRAIDKWAP PGQRLLLVTS EGRVIGAERS EMQIIRNFIG QADNADHPQK
KKYGRVEMVG PFSVRDGEDN YQLYLIRPAS SSQSDFINLL FDRPLLLLIV TMLVSSPLLL
WLAWSLAKPA RKLKNAADEV AQGNLRQHPE LEAGPQEFLA AGASFNQMVT ALERMMTSQQ
RLLSDISHEL RTPLTRLQLG TALLRRRGGE SKELERIETE AQRLDSMIND LLVMSRNQQK
NALVSETMKA NQLWGEVLDN AAFEAEQMGK SLTVNYPPGP WPLYGNPNAL ESALENIVRN
ALRYSHTKIE VGFSVDKDGI TITVDDDGPG VSPEDREQIF RPFYRTDEAR DRESGGTGLG
LAIVESAMQQ HRGWVKADDS PLGGLRLTLW LPLYKRT