Gene SNSL254_A4290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4290 
SymboltypA 
ID6486402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4181970 
End bp4183793 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content54% 
IMG OID642739536 
ProductGTP-binding protein 
Protein accessionYP_002043230 
Protein GI194443181 
COG category[T] Signal transduction mechanisms 
COG ID[COG1217] Predicted membrane GTPase involved in stress response 
TIGRFAM ID[TIGR01394] GTP-binding protein TypA/BipA
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.40714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAAA ATTTGCGTAA CATCGCCATC ATCGCGCACG TTGACCATGG TAAAACTACC 
CTGGTTGATA AGCTGCTCCA GCAATCCGGT ACGTTCGACG CGCGTGCCGA AACTCAAGAG
CGAGTGATGG ACTCCAACGA TTTGGAGAAA GAGCGTGGTA TTACTATCCT CGCTAAAAAC
ACCGCTATTA AATGGAATGA TTACCGTATC AACATCGTTG ATACTCCCGG GCACGCTGAC
TTCGGTGGTG AAGTAGAGCG CGTCATGTCC ATGGTTGACT CTGTGCTGCT GGTGGTTGAC
GCATTTGACG GCCCGATGCC GCAAACGCGC TTCGTGACCA AAAAAGCCTT TGCTCATGGC
CTGAAACCCA TTGTGGTTAT TAACAAAGTT GACCGTCCTG GCGCGCGCCC TGACTGGGTT
GTTGACCAGG TATTCGACCT GTTTGTTAAC CTCGACGCGA CCGACGAACA GCTGGACTTC
CCGATCATCT ACGCTTCGGC GCTGAACGGT ATCGCGGGTC TGGACCACGA AGATATGGCG
GAAGACATGA CCCCGCTATA TCAGGCGATC GTTGATCATG TTCCGGCGCC GGACGTTGAC
CTCGATGGTC CGTTGCAGAT GCAGATCTCC CAGCTGGACT ACAACAACTA CGTTGGCGTT
ATCGGCATCG GCCGTATCAA ACGCGGCAAA GTGAAGCCGA ACCAGCAGGT CACTATCATC
GATAGTGAAG GGAAAACCCG TAACGCGAAA GTAGGTAAAG TGCTCACGCA TCTGGGTCTG
GAGCGTATCG ACAGCGATAT CGCCGAAGCG GGCGATATCA TTGCGATCAC CGGTCTGGGC
GAGCTGAACA TTTCCGACAC CATCTGCGAC CCGCAGAACG TTGAAGCGCT GCCGGCGCTG
TCCGTTGATG AGCCGACCGT GTCTATGTTC TTCTGCGTTA ACACCTCGCC GTTCTGCGGT
AAAGAAGGTA AGTTTGTGAC TTCTCGTCAG ATTCTTGACC GTCTGAACAA AGAGTTGGTG
CATAACGTGG CGCTGCGCGT TGAAGAAACC GAAGATGCGG ATGCGTTCCG TGTATCCGGT
CGTGGCGAAC TGCACCTGTC CGTGCTGATT GAAAACATGC GTCGTGAAGG TTTCGAACTG
GCGGTTTCCC GTCCGAAAGT TATCTTCCGT GAAATCGACG GTCGTAAACA AGAGCCGTAC
GAAAACGTGA CGCTGGACGT CGAAGAGCAG CACCAGGGGT CTGTCATGCA GGCGCTGGGC
GAGCGTAAAG GCGACCTGAA AAACATGAAT CCGGACGGTA AAGGCCGCGT ACGTCTCGAC
TACGTGATCC CAAGCCGTGG GCTGATTGGT TTCCGTTCAG AATTCATGAC CATGACTTCC
GGTACGGGTC TGCTGTACTC CACCTTCAGC CATTACGACG ATATTCGTCC GGGTGAAGTG
GGCCAGCGTC AGAACGGCGT ACTGATCTCT AACGGTCAGG GTAAAGCGGT GGCGTTTGCG
CTGTTCGGTT TGCAGGATCG CGGTAAGCTG TTCCTGGGCC ACGGCGCGGA AGTTTATGAA
GGCCAGATTA TTGGTATTCA CAGTCGCTCC AACGACCTGA CGGTAAACTG CCTGACCGGT
AAGAAACTGA CCAACATGCG TGCGTCTGGT ACGGATGAAG CGGTGATTCT GGTTCCGCCA
ATTAAAATGA GCCTTGAGCA AGCGCTGGAG TTCATTGATG ACGACGAACT GGTAGAAGTC
ACCCCAACCT CTATCCGTAT CCGTAAACGT CACCTGACGG AAAACGATCG CCGCCGTGCG
AACCGTGGTC AGAAAGAAGA GTAA
 
Protein sequence
MIENLRNIAI IAHVDHGKTT LVDKLLQQSG TFDARAETQE RVMDSNDLEK ERGITILAKN 
TAIKWNDYRI NIVDTPGHAD FGGEVERVMS MVDSVLLVVD AFDGPMPQTR FVTKKAFAHG
LKPIVVINKV DRPGARPDWV VDQVFDLFVN LDATDEQLDF PIIYASALNG IAGLDHEDMA
EDMTPLYQAI VDHVPAPDVD LDGPLQMQIS QLDYNNYVGV IGIGRIKRGK VKPNQQVTII
DSEGKTRNAK VGKVLTHLGL ERIDSDIAEA GDIIAITGLG ELNISDTICD PQNVEALPAL
SVDEPTVSMF FCVNTSPFCG KEGKFVTSRQ ILDRLNKELV HNVALRVEET EDADAFRVSG
RGELHLSVLI ENMRREGFEL AVSRPKVIFR EIDGRKQEPY ENVTLDVEEQ HQGSVMQALG
ERKGDLKNMN PDGKGRVRLD YVIPSRGLIG FRSEFMTMTS GTGLLYSTFS HYDDIRPGEV
GQRQNGVLIS NGQGKAVAFA LFGLQDRGKL FLGHGAEVYE GQIIGIHSRS NDLTVNCLTG
KKLTNMRASG TDEAVILVPP IKMSLEQALE FIDDDELVEV TPTSIRIRKR HLTENDRRRA
NRGQKEE