Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4241 |
Symbol | pldB |
ID | 6485626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4130619 |
End bp | 4131635 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642739492 |
Product | lysophospholipase L2 |
Protein accession | YP_002043191 |
Protein GI | 194445018 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.194167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 0.797648 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCAGC AGCAAAATGA CTGGGAAACA AGAGAAAATG CGTTTGCCGC TTTTGCTATG GGGCCGCTGA CCGATTTCTG GCGTCAGCGG GAAGAGGCGG AGTTTATCGG CGTGGGTAAC ATTCCGGTGC GCTTTGTCCG TTTTCGAAAT GATTCCAACG ATCGGACGAT CGTCATTTGT CCTGGCCGCA TTGAGAGTTA TGTAAAATAC GCTGAACTGG CGTATGACCT TTTTCATCTC GGTTTTGATA TCTTCATCAT CGACCACCGT GGTCAAGGGC GCTCCGGGCG GATGTTATCG GACCCGCATC GGGGTCATGT CGATCATTTT AACGATTATG TTGAGGACTT AGCGGCGTTC TGGCAGCAGG AAATTGAGCC GGGGCCGTGG CGTAAGCGTT ATATCCTGGC GCACTCAATG GGGGGCGCGA TAGCCACTCT GTTCCTGCAA CGCCATCGTG TGCGGTGCGA CGCTATTGCG CTCACCGCGC CGATGTTTGG TATTGTGATA CGCTTGCCTT CCTTTATGGT GCGCCATATT CTCGACTGGG CTGAAGGGCA CCAGCGTATC CGTGAAGATT ACGCTATTGG TACCGGTCAG TGGCGGGCGT TGCCGTTTGG GATGAATGCG CTGACCCACA GCCGCCAGCG TTATCAGCGC AACTTACGAT TTTATGCCGA CGAGCCGCAA CTGCGCGTTG GCGGCCCCAC CTGGCATTGG GTACGCGAAG GCATTCTGGC GGGTGAGCAG GTACTGGCCG GGGCGAGCGA TGACACGACG CCTACGCTAT TGATTCAGGC GGAAGAAGAG CGGGTAGTGG ATAACCGCAC CCACGATCGT TTTTGTGAAA TTCGCGCCGC GGCGGGATAC CCTTGTGAAG GGGGAAAACC GCTGGTTATC AAAGGCGCGT ACCATGAGAT CCTTTTTGAA AAGGACGCCA TGCGCTCAGT CGCGCTTAAC GCCATTGTTG AATTTTTCAA CAAGCCTAAT TTATCCAGCG GAAATCGCTT TGCTTAG
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Protein sequence | MFQQQNDWET RENAFAAFAM GPLTDFWRQR EEAEFIGVGN IPVRFVRFRN DSNDRTIVIC PGRIESYVKY AELAYDLFHL GFDIFIIDHR GQGRSGRMLS DPHRGHVDHF NDYVEDLAAF WQQEIEPGPW RKRYILAHSM GGAIATLFLQ RHRVRCDAIA LTAPMFGIVI RLPSFMVRHI LDWAEGHQRI REDYAIGTGQ WRALPFGMNA LTHSRQRYQR NLRFYADEPQ LRVGGPTWHW VREGILAGEQ VLAGASDDTT PTLLIQAEEE RVVDNRTHDR FCEIRAAAGY PCEGGKPLVI KGAYHEILFE KDAMRSVALN AIVEFFNKPN LSSGNRFA
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