Gene SNSL254_A4186 details

Gene Information

• Locus tag: SNSL254_A4186
• Symbol: ilvD
• ID: 6483511
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Newport str. SL254
• Kingdom: Bacteria
• Replicon accession: NC_011080
• Strand: +
• Start bp: 4078280
• End bp: 4080130
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 642739440
• Product: dihydroxy-acid dehydratase
• Protein accession: YP_002043143
• Protein GI: 194442868
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 94
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCTAAGT ACCGTTCCGC CACCACCACC CATGGTCGTA ATATGGCGGG TGCCCGCGCG 
CTGTGGCGCG CCACCGGAAT GACCGACAGT GATTTTGGCA AACCGATTAT CGCCGTGGTG 
AACTCATTCA CTCAGTTTGT GCCGGGTCAC GTTCATCTGC GCGATCTCGG TAAGCTGGTC 
GCCGAACAGA TTGAAGCTTC CGGCGGGGTG GCGAAAGAGT TCAACACTAT TGCCGTGGAT 
GACGGGATTG CCATGGGGCA CGGGGGTATG CTCTATTCAC TGCCGTCGCG CGAGCTGATC 
GCCGACTCCG TTGAGTACAT GGTGAACGCT CACTGCGCTG ACGCGATGGT GTGTATCTCC 
AACTGCGACA AAATCACCCC AGGGATGCTC ATGGCCTCGC TGCGCCTGAA TATTCCGGTG 
ATCTTTGTCT CCGGCGGCCC GATGGAAGCC GGGAAAACCA AGCTTTCAGA CAAAATTATC 
AAGCTGGATC TGGTTGATGC CATGATTCAG GGAGCGGACC CGAAAGTCTC TGACGATCAA 
AGTAACCAGG TTGAACGCTC CGCCTGTCCA ACCTGCGGCT CCTGCTCCGG CATGTTTACC 
GCTAACTCCA TGAATTGCCT GACCGAAGCG CTGGGCCTGT CGCAGCCGGG CAACGGCTCG 
CTGCTGGCAA CTCACGCTGA CCGTAAGCAG TTGTTCCTCA ATGCCGGTAA GCGGATTGTT 
GAACTGACTA AACGCTATTA CGAGCAAAAC GACGAAAGTG CACTGCCGCG TAACATCGCC 
AGCAAAGCCG CGTTTGAAAA CGCGATGACG CTGGATATCG CGATGGGCGG TTCGACCAAC 
ACCGTTCTTC ACCTGCTGGC GGCGGCGCAG GAAGCGGAAA TCGACTTCAC CATGAGTGAT 
ATCGACAAGC TGTCCCGCAA GGTGCCGCAG CTGTGTAAAG TGGCGCCAAG TACCCAGAAA 
TACCATATGG AAGATGTTCA CCGTGCCGGC GGTGTGCTGG GTATTTTAGG CGAGCTGGAT 
CGCGCCGGGC TGCTGAACCG CAACGTGAAA AACGTATTAG GCCTGACGCT GCCGCAAACG 
CTGGAACAGT ACGACATCAC GGTTACGCAG GACGAAGCGG TTAAAAAAAT GTTCCGTGCT 
GGCCCTGCCG GTATCCGTAC TACTCAGGCG TTCTCGCAGG ATTGTCGCTG GGATTCGCTG 
GATGACGACC GCGCAGCGGG TTGCATCCGC TCGCTGGAAT ATGCCTATAG CAAAGACGGC 
GGTCTGGCGG TGCTGTATGG CAACTTCGCC GAAAACGGCT GCATCGTTAA AACCGCGGGC 
GTCGATGACA GCATCCTTAA ATTCACCGGC CCGGCGAAAG TGTATGAAAG TCAGGATGAG 
GCGGTAGAGG CGATTCTCGG CGGCAAAGTA GTGGAAGGCG ATGTAGTCGT GATCCGCTAC 
GAAGGGCCGA AAGGCGGGCC GGGAATGCAG GAAATGCTCT ATCCGACCAG TTTCCTGAAG 
TCGATGGGGC TGGGCAAAGC CTGCGCGCTC ATCACCGATG GGCGTTTTTC CGGCGGGACT 
TCCGGTCTCT CTATTGGCCA CGTTTCGCCG GAAGCGGCCA GCGGCGGCAC TATTGCGTTG 
ATTGAAGATG GCGACACTAT TGCGATTGAT ATCCCGAACC GCAGCATTCA GTTGCAGTTG 
AGTGAGGCTG AAATCGCCGC ACGCCGCGAG GCGCAGGAAG CTCGTGGCGA CAAAGCCTGG 
ACGCCGAAAA ATCGTCAGCG TCAGGTTTCG TTTGCCCTGC GTGCCTACGC CAGCCTGGCG 
ACCAGCGCCG ATAAAGGCGC GGTGCGCGAT AAATCGAAAC TGGGAGGTTG A 

 

Protein sequence

MPKYRSATTT HGRNMAGARA LWRATGMTDS DFGKPIIAVV NSFTQFVPGH VHLRDLGKLV 
AEQIEASGGV AKEFNTIAVD DGIAMGHGGM LYSLPSRELI ADSVEYMVNA HCADAMVCIS 
NCDKITPGML MASLRLNIPV IFVSGGPMEA GKTKLSDKII KLDLVDAMIQ GADPKVSDDQ 
SNQVERSACP TCGSCSGMFT ANSMNCLTEA LGLSQPGNGS LLATHADRKQ LFLNAGKRIV 
ELTKRYYEQN DESALPRNIA SKAAFENAMT LDIAMGGSTN TVLHLLAAAQ EAEIDFTMSD 
IDKLSRKVPQ LCKVAPSTQK YHMEDVHRAG GVLGILGELD RAGLLNRNVK NVLGLTLPQT 
LEQYDITVTQ DEAVKKMFRA GPAGIRTTQA FSQDCRWDSL DDDRAAGCIR SLEYAYSKDG 
GLAVLYGNFA ENGCIVKTAG VDDSILKFTG PAKVYESQDE AVEAILGGKV VEGDVVVIRY 
EGPKGGPGMQ EMLYPTSFLK SMGLGKACAL ITDGRFSGGT SGLSIGHVSP EAASGGTIAL 
IEDGDTIAID IPNRSIQLQL SEAEIAARRE AQEARGDKAW TPKNRQRQVS FALRAYASLA 
TSADKGAVRD KSKLGG