Gene SNSL254_A4169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4169 
Symbol 
ID6484057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4062828 
End bp4063826 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content53% 
IMG OID642739425 
Producttranscriptional repressor RbsR 
Protein accessionYP_002043134 
Protein GI194443040 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.451515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTACTA TGAAAGATGT TGCCCGCCTG GCGGGAGTCT CTACATCGAC GGTCTCTCAC 
GTTATTAACA AAGATCGCTT TGTGAGTGAG ACGATAACCG AAAAAGTTGA AGCGGCGATT
AAATCACTTA ACTATGCGCC TTCTGCGCTG GCGCGAAGCC TCAAGTTAAA CCAGACCCGC
ACGATTGGTA TGCTAATTAC CGCCAGTACC AACCCTTTTT ATTCCGAACT GGTGCGCGGC
GTTGAGCGAA GCTGTTTTGA GCGCGGTTAT AGTCTGGTGT TGTGCAATAC CGAAGGCGAC
GAGCAACGGA TGAACCGCAA CCTGGAGACC CTGATGCAAA AACGGGTAGA CGGTTTACTG
CTGCTGTGTA CCGAAACGCA TCAGCCTTCT CGTGAAATCA TGGAGCGTTA TCCGTCTATT
CCTACCGTCA TGATGGACTG GTCGCCGTTT GATGGCGAGG GCGGTAGCGA TCTCATTCAG
GATAATTCGT TGTTAGGCGG CGATCTTGCC ACCCAACACC TTATCGATAA AGGATTTACC
CGAATAGCCT GTATTACCGG CCCGCTGGAC AAAACGCCAG CGCGTTTGCG GCTGGAAGGG
TATCGGGCGG CGATGAAACG CGCAGGGCTG GCTATTCCGC AAGGCTATGA GATCACCGGC
GATTTTGAAT TTGGCGGCGG CTTTGACGCC ATGCAGGCGT TACTCGCCCA TCAACAGCGA
CCGCAAGCGG TTTTTACCGG AAACGATGCG ATGGCTGTCG GCGCCTATCA GGCGCTATAT
CAGGCGGGGC TTCGTATTCC GCAGGATATG GCAGTCATTG GCTATGATGA TATTGAGCTG
GCGCGCTATA TGACGCCGCC GCTGACGACT ATCCATCAGC CGAAAGATGA ATTGGGCGAG
CTGGCTATTG ATGTGTTGAT TCATCGGATG GCGCAGCCCG CCTTGCAACA ACAGCGACTT
CAGCTTACTC CGATTTTGAC GGTGCGTGGG TCGGTTTAG
 
Protein sequence
MATMKDVARL AGVSTSTVSH VINKDRFVSE TITEKVEAAI KSLNYAPSAL ARSLKLNQTR 
TIGMLITAST NPFYSELVRG VERSCFERGY SLVLCNTEGD EQRMNRNLET LMQKRVDGLL
LLCTETHQPS REIMERYPSI PTVMMDWSPF DGEGGSDLIQ DNSLLGGDLA TQHLIDKGFT
RIACITGPLD KTPARLRLEG YRAAMKRAGL AIPQGYEITG DFEFGGGFDA MQALLAHQQR
PQAVFTGNDA MAVGAYQALY QAGLRIPQDM AVIGYDDIEL ARYMTPPLTT IHQPKDELGE
LAIDVLIHRM AQPALQQQRL QLTPILTVRG SV