Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4167 |
Symbol | rbsB |
ID | 6486136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4060872 |
End bp | 4061762 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642739423 |
Product | D-ribose transporter subunit RbsB |
Protein accession | YP_002043132 |
Protein GI | 194443386 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 85 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATGA AAAAACTGGC TACCCTGGTA TCTGCTGTTG CGCTGAGCGC CACCGTGAGC GCGAATGCAA TGGCGAAAGA CACCATTGCG CTGGTGATCT CTACCCTCAA TAATCCCTTC TTCGTGTCGT TAAAAGACGG GGCGCAAAAA GAGGCGGATA AACTGGGTTA TAACCTGGTG GTGCTGGACT CCCAGAACAA CCCTGCCAAA GAGCTGGCGA ACGTGCAGGA TTTAACCGTT CGCGGGACCA AAATTCTGCT GATCAACCCG ACTGACTCCG ATGCGGTGGG TAACGCGGTG AAGATGGCTA ACCAGGCGAA GATTCCGGTT ATCACGCTTG ACCGCCAGGC AACCAAAGGT GATGTCGTCA GCCATATCGC GTCTGATAAC GTGCTGGGCG GTAAGATCGC TGGCGACTAT ATCGCGAAAA AAGCTGGCGA AGGCGCCAAA GTGATTGAGT TGCAAGGCAT TGCCGGAACA TCTGCGGCGC GTGAGCGTGG CGAAGGTTTC CAGCAGGCGG TAGCCGCTCA CAAATTTAAT GTCCTGGCCA GCCAGCCTGC CGATTTCGAC CGTACTAAGG GTCTGAACGT CATGCAGAAC CTGCTGACCG CGCATCCGGA TGTTCAGGCT GTCTTCGCCC AGAACGATGA AATGGCGCTG GGCGCACTGC GCGCGCTGCA AACTGCCGGT AAAGCAGATG TGATGGTGGT TGGATTTGAC GGTACGCCGG ATGGCGAAAA GGCCGTAAAA GATGGCAAAC TGGCAGCGAC TATCGCTCAG TTACCGGATC AAATCGGCGC CAAAGGCGTT GAAGTGGCGG ATAAGGTGCT GAAAGGCGAA AAAGTTCAGG CCAAATATCC GGTTGACCTG AAACTGGTCA TCAAGCAGTA A
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Protein sequence | MNMKKLATLV SAVALSATVS ANAMAKDTIA LVISTLNNPF FVSLKDGAQK EADKLGYNLV VLDSQNNPAK ELANVQDLTV RGTKILLINP TDSDAVGNAV KMANQAKIPV ITLDRQATKG DVVSHIASDN VLGGKIAGDY IAKKAGEGAK VIELQGIAGT SAARERGEGF QQAVAAHKFN VLASQPADFD RTKGLNVMQN LLTAHPDVQA VFAQNDEMAL GALRALQTAG KADVMVVGFD GTPDGEKAVK DGKLAATIAQ LPDQIGAKGV EVADKVLKGE KVQAKYPVDL KLVIKQ
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