Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4165 |
Symbol | rbsA |
ID | 6483078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4058371 |
End bp | 4059876 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642739421 |
Product | D-ribose transporter ATP binding protein |
Protein accession | YP_002043130 |
Protein GI | 194445619 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.846402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 91 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGCAT TACTGCAACT CAAAGGGATC GATAAAGCGT TCCCCGGCGT GAAGGCTCTC TCCGGCGCCG CGTTAAACGT TTATCCTGGC CGCGTTATGG CGCTGGTGGG GGAAAACGGC GCCGGAAAAT CCACCATGAT GAAAGTATTA ACCGGCATCT ATACGCGAGA TGCGGGATCG TTGTTATGGC TGGGTAAAGA GACCACCTTT AATGGGCCTA AATCGTCTCA GGAAGCCGGG ATCGGCATTA TTCATCAGGA ACTGAACCTG ATTCCGCAGT TGACCATTGC GGAAAACATC TTCCTGGGCC GTGAGTTTGT GAATCGCTTT GGCAAAATCG ACTGGAAAAA GATGTATGCC GAAGCCGACC ACCTCTTAGC CAAACTCAAT CTGCGTTTTA AGAGCGATAA GCTGGTGGGC GAACTCTCTA TCGGCGATCA GCAAATGGTG GAAATCGCCA AAGTGCTGAG CTTCGAATCC AAAGTCATCA TTATGGATGA ACCGACCGAT GCGCTGACCG ACACTGAAAC CGACTCTCTG TTCCGCGTTA TCCGCGAATT AAAATCGCAG GGGCGCGGCA TTGTCTATAT CTCCCACCGT ATGAAAGAGA TCTTCGAAAT TTGCGATGAC GTGACGGTCT TCCGCGATGG GCAATTTATC GCCGAGCGTG AAGTGGCCAC GTTGACCGAA GATTCTCTTA TCGAAATGAT GGTGGGACGT AAGCTGGAAG ATCAGTACCC GCATCTGGAT AACGCGCCGG GTGAGATTCG CCTGAAGGTC GATAATCTGT GCGGACCGGG CGTGAATGAT GTCTCTTTTG TGCTGCGAAA AGGCGAGATT CTTGGCATTT CCGGCCTGAT GGGCGCCGGT CGCACCGAGC TGATGAAAGT ATTGTACGGC GCGATGCCGC GAACCAGCGG TTACGTGACG CTCGATGGAC ACGAAGTGGT GACGCGTTCT CCGCAGGACG GGCTGGCCAA TGGCATCGTT TATATCTCTG AAGACCGTAA GCGCGATGGA CTGGTGCTCG GCATGTCAGT TAAAGAGAAT ATGTCGCTGA CTGCGCTGGA TTATTTCAGC CGCGCTGGCG GAAGCCTGAA ACACAAAGAT GAGCAGCAGG CGGTGGGGGA TTTTATCCGT CTGTTCAACG TCAAGACGCC GTCAATGGAA CAGGCGATAG GCCTGCTTTC TGGCGGTAAT CAGCAAAAAG TGGCGATTGC TCGCGGGTTG ATGACGCGCC CGAAAGTGCT CATTCTCGAC GAGCCGACCC GCGGCGTGGA CGTCGGCGCC AAGAAAGAGA TTTATCAGCT TATCAACCAG TTTAAGGCCG ACGGCCTGAG CATCATTCTG GTCTCATCTG AGATGCCAGA AGTATTAGGC ATGAGCGATC GCATCATCGT CATGCATGAA GGGCATCTCA GCGGTGAATT TACTCGCGAG CAGGCCACCC AGGAAGTGTT AATGGCTGCC GCAGTGGGCA AGCTTAATCG CGTGAATCAG GAGTAA
|
Protein sequence | MDALLQLKGI DKAFPGVKAL SGAALNVYPG RVMALVGENG AGKSTMMKVL TGIYTRDAGS LLWLGKETTF NGPKSSQEAG IGIIHQELNL IPQLTIAENI FLGREFVNRF GKIDWKKMYA EADHLLAKLN LRFKSDKLVG ELSIGDQQMV EIAKVLSFES KVIIMDEPTD ALTDTETDSL FRVIRELKSQ GRGIVYISHR MKEIFEICDD VTVFRDGQFI AEREVATLTE DSLIEMMVGR KLEDQYPHLD NAPGEIRLKV DNLCGPGVND VSFVLRKGEI LGISGLMGAG RTELMKVLYG AMPRTSGYVT LDGHEVVTRS PQDGLANGIV YISEDRKRDG LVLGMSVKEN MSLTALDYFS RAGGSLKHKD EQQAVGDFIR LFNVKTPSME QAIGLLSGGN QQKVAIARGL MTRPKVLILD EPTRGVDVGA KKEIYQLINQ FKADGLSIIL VSSEMPEVLG MSDRIIVMHE GHLSGEFTRE QATQEVLMAA AVGKLNRVNQ E
|
| |