Gene SNSL254_A4165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4165 
SymbolrbsA 
ID6483078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4058371 
End bp4059876 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content53% 
IMG OID642739421 
ProductD-ribose transporter ATP binding protein 
Protein accessionYP_002043130 
Protein GI194445619 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.846402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAT TACTGCAACT CAAAGGGATC GATAAAGCGT TCCCCGGCGT GAAGGCTCTC 
TCCGGCGCCG CGTTAAACGT TTATCCTGGC CGCGTTATGG CGCTGGTGGG GGAAAACGGC
GCCGGAAAAT CCACCATGAT GAAAGTATTA ACCGGCATCT ATACGCGAGA TGCGGGATCG
TTGTTATGGC TGGGTAAAGA GACCACCTTT AATGGGCCTA AATCGTCTCA GGAAGCCGGG
ATCGGCATTA TTCATCAGGA ACTGAACCTG ATTCCGCAGT TGACCATTGC GGAAAACATC
TTCCTGGGCC GTGAGTTTGT GAATCGCTTT GGCAAAATCG ACTGGAAAAA GATGTATGCC
GAAGCCGACC ACCTCTTAGC CAAACTCAAT CTGCGTTTTA AGAGCGATAA GCTGGTGGGC
GAACTCTCTA TCGGCGATCA GCAAATGGTG GAAATCGCCA AAGTGCTGAG CTTCGAATCC
AAAGTCATCA TTATGGATGA ACCGACCGAT GCGCTGACCG ACACTGAAAC CGACTCTCTG
TTCCGCGTTA TCCGCGAATT AAAATCGCAG GGGCGCGGCA TTGTCTATAT CTCCCACCGT
ATGAAAGAGA TCTTCGAAAT TTGCGATGAC GTGACGGTCT TCCGCGATGG GCAATTTATC
GCCGAGCGTG AAGTGGCCAC GTTGACCGAA GATTCTCTTA TCGAAATGAT GGTGGGACGT
AAGCTGGAAG ATCAGTACCC GCATCTGGAT AACGCGCCGG GTGAGATTCG CCTGAAGGTC
GATAATCTGT GCGGACCGGG CGTGAATGAT GTCTCTTTTG TGCTGCGAAA AGGCGAGATT
CTTGGCATTT CCGGCCTGAT GGGCGCCGGT CGCACCGAGC TGATGAAAGT ATTGTACGGC
GCGATGCCGC GAACCAGCGG TTACGTGACG CTCGATGGAC ACGAAGTGGT GACGCGTTCT
CCGCAGGACG GGCTGGCCAA TGGCATCGTT TATATCTCTG AAGACCGTAA GCGCGATGGA
CTGGTGCTCG GCATGTCAGT TAAAGAGAAT ATGTCGCTGA CTGCGCTGGA TTATTTCAGC
CGCGCTGGCG GAAGCCTGAA ACACAAAGAT GAGCAGCAGG CGGTGGGGGA TTTTATCCGT
CTGTTCAACG TCAAGACGCC GTCAATGGAA CAGGCGATAG GCCTGCTTTC TGGCGGTAAT
CAGCAAAAAG TGGCGATTGC TCGCGGGTTG ATGACGCGCC CGAAAGTGCT CATTCTCGAC
GAGCCGACCC GCGGCGTGGA CGTCGGCGCC AAGAAAGAGA TTTATCAGCT TATCAACCAG
TTTAAGGCCG ACGGCCTGAG CATCATTCTG GTCTCATCTG AGATGCCAGA AGTATTAGGC
ATGAGCGATC GCATCATCGT CATGCATGAA GGGCATCTCA GCGGTGAATT TACTCGCGAG
CAGGCCACCC AGGAAGTGTT AATGGCTGCC GCAGTGGGCA AGCTTAATCG CGTGAATCAG
GAGTAA
 
Protein sequence
MDALLQLKGI DKAFPGVKAL SGAALNVYPG RVMALVGENG AGKSTMMKVL TGIYTRDAGS 
LLWLGKETTF NGPKSSQEAG IGIIHQELNL IPQLTIAENI FLGREFVNRF GKIDWKKMYA
EADHLLAKLN LRFKSDKLVG ELSIGDQQMV EIAKVLSFES KVIIMDEPTD ALTDTETDSL
FRVIRELKSQ GRGIVYISHR MKEIFEICDD VTVFRDGQFI AEREVATLTE DSLIEMMVGR
KLEDQYPHLD NAPGEIRLKV DNLCGPGVND VSFVLRKGEI LGISGLMGAG RTELMKVLYG
AMPRTSGYVT LDGHEVVTRS PQDGLANGIV YISEDRKRDG LVLGMSVKEN MSLTALDYFS
RAGGSLKHKD EQQAVGDFIR LFNVKTPSME QAIGLLSGGN QQKVAIARGL MTRPKVLILD
EPTRGVDVGA KKEIYQLINQ FKADGLSIIL VSSEMPEVLG MSDRIIVMHE GHLSGEFTRE
QATQEVLMAA AVGKLNRVNQ E