| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4162 |
|---|
| Symbol | |
|---|
| ID | 6482561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 4054015 |
|---|
| End bp | 4055511 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642739418 |
|---|
| Product | regulatory ATPase RavA |
|---|
| Protein accession | YP_002043127 |
|---|
| Protein GI | 194442906 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0714] MoxR-like ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.598382 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 94 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCACC CACATTTATT AGCGGAAAGA ATTTCCCGTC TGAGCAGCGC CCTTGAGAAG
GGACTGTATG AACGTAGTCA TGCCATACGC CTTTGCCTAC TGGCGGCGTT AAGCGGTGAG
AGCGTCTTTT TGTTGGGCCC GCCCGGTATC GCCAAGAGTC TGATTGCCCG CCGCCTGAAG
TTTGCTTTCC AGCGCGCCCG CGCTTTTGAA TATCTGATGA CACGCTTTTC CACGCCGGAA
GAGGTTTTTG GCCCGCTCTC TATTCAGGCG CTGAAAGATG AAGGTCGCTA TGAACGCTTA
ACGACCGGCT ACCTTCCCGA AGCCGAAATC GTTTTTCTGG ATGAAATCTG GAAAGCCGGG
CCCGCTATCC TGAACACATT GCTGACCGCC ATTAACGAAC GCCATTTCCG CAACGGCGCA
TTTGAGGAAA AAATCCCGAT GCGGCTACTG GTGGCGGCCT CTAACGAACT GCCCGAAGCG
GACAGCAGCC TGGAAGCCTT GTACGACCGA ATGTTGATTC GCCTGTGGCT GGATAAAGTT
CAGGATAAAG CCAATTTCCG CTCCATGCTG GTTAGTCAGC AGGATGAGAG TGATAACCCG
GTCCCCGCCT CGTTACAGGT AAGCGACGAA GAATATCAAC AGTGGCAAAA AGATATCGGC
GCGATTTCAC TCCCTGATCC GGTCTTTGAG CTGATATTTA CTCTGCGCCA ACAGCTGGAT
AATTTGCCGA ATGCGCCTTA TGTCTCCGAC CGTCGCTGGA AGAAAGCCAT CCGCCTGTTA
CAGGCCAGCG CCTTCTTTAG CGGACGCGAC GCGGTTGCGC CGATTGACCT TATCCTGCTA
AAAGATTGCT TGTGGTATGA CGCGCAGAGT CTGAATCTCA TGCAACAGCA ACTAGAAATA
TTGATGACCG GACACGCCTG GCAGCAGCAG GCCATGCTGA CTCGCCTCGG CGGTATCGTC
CAGCGCCGCC TCCAGTTGCA GCAACAGCAA AGCGATAAAA CCGCCTTCAC CGTCATTAAA
GAAGGCGGTA TGTTCAGCCG CCGCCCGCAT TACACTTTAC CGCCGGAAGT CAGTGCATCA
ACGTTGACGT TATTGCTACA AAAACCGCTA AAACTGCATG ATATGGAAGT GATCCATATT
ACTTTTGACC GCAGCGCGCT GGAACTTTGG CTGACCAAAG GCGGCGAGAT CCGCGGCAAA
CTGAACGGGA TCGGCTTTGC CCAAACGTTG AATATGGAAG TCGATAACGC TCAACATCTG
GTGGTGCGCG ACATCAGTCT ACAAGGTACC CGTCTGGCGT TACCGGGAAC GGCTGAAGAC
AGTATGCCTG CGGAGATCAA ACAGCAGCTG GAAACGTTAG AAAACGACTG GCGCCAGCAG
CATACCCGCT TCAGCGAACA GCAACATTGC CTGTTTATTC ACAGCGACTG GTTAGGGCGC
ATTGAGGCCA GCCTGCAGGA TGTAGGAGAA CAGATCCGCC AGGCGAAACA ATGCTGA
|
|---|
| Protein sequence | MAHPHLLAER ISRLSSALEK GLYERSHAIR LCLLAALSGE SVFLLGPPGI AKSLIARRLK
FAFQRARAFE YLMTRFSTPE EVFGPLSIQA LKDEGRYERL TTGYLPEAEI VFLDEIWKAG
PAILNTLLTA INERHFRNGA FEEKIPMRLL VAASNELPEA DSSLEALYDR MLIRLWLDKV
QDKANFRSML VSQQDESDNP VPASLQVSDE EYQQWQKDIG AISLPDPVFE LIFTLRQQLD
NLPNAPYVSD RRWKKAIRLL QASAFFSGRD AVAPIDLILL KDCLWYDAQS LNLMQQQLEI
LMTGHAWQQQ AMLTRLGGIV QRRLQLQQQQ SDKTAFTVIK EGGMFSRRPH YTLPPEVSAS
TLTLLLQKPL KLHDMEVIHI TFDRSALELW LTKGGEIRGK LNGIGFAQTL NMEVDNAQHL
VVRDISLQGT RLALPGTAED SMPAEIKQQL ETLENDWRQQ HTRFSEQQHC LFIHSDWLGR
IEASLQDVGE QIRQAKQC
|
|---|
| |