| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4120 |
|---|
| Symbol | gyrB |
|---|
| ID | 6486687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 4009438 |
|---|
| End bp | 4011852 |
|---|
| Gene Length | 2415 bp |
|---|
| Protein Length | 804 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642739376 |
|---|
| Product | DNA gyrase subunit B |
|---|
| Protein accession | YP_002043085 |
|---|
| Protein GI | 194442844 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
|---|
| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 82 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAATT CTTATGACTC CTCCAGTATC AAAGTCCTGA AAGGGCTGGA TGCGGTGCGT
AAGCGCCCGG GTATGTATAT CGGCGACACG GATGACGGCA CCGGTCTGCA CCACATGGTA
TTCGAGGTGG TAGATAACGC TATCGACGAA GCGCTCGCAG GTCACTGTAA AGATATCGTC
GTGACTATTC ACGCCGATAA CTCCGTGTCC GTAACGGATG ATGGCCGTGG CATTCCTACC
GGGATTCACC CGGAAGAAGG CGTCTCGGCG GCGGAAGTGA TCATGACCGT TCTGCACGCG
GGCGGTAAAT TTGACGATAA CTCCTATAAA GTCTCCGGCG GTCTGCACGG CGTGGGCGTC
TCGGTAGTCA ACGCTCTGTC GCAAAAACTG GAACTGGTTA TCCAGCGAGA TGGCAAAATT
CACCGTCAGA TCTACGAGCA CGGCGTGCCG CAGGCACCCC TGGCCGTCAC TGGCGATACC
GATAAAACCG GCACGATGGT ACGTTTCTGG CCGAGCCACG AAACCTTCAC CAACGTCACT
GAATTTGAAT ATGAGATCCT GGCGAAACGC CTGCGTGAAC TGTCATTCCT GAACTCAGGC
GTCTCCATCC GCCTGCGCGA CAAGCGCGAT GGCAAAGAAG ATCATTTCCA CTACGAAGGC
GGCATCAAGG CGTTTGTTGA ATATCTGAAC AAGAATAAAA CGCCGATCCA CCCGAATATC
TTCTACTTCT CCACCGAAAA AGACGGTATC GGCGTGGAAG TAGCGCTACA GTGGAACGAT
GGTTTCCAGG AAAACATCTA CTGCTTTACC AACAACATTC CGCAGCGCGA CGGCGGTACC
CACCTGGCAG GCTTCCGTGC GGCGATGACC CGCACGCTGA ACGCCTATAT GGACAAAGAA
GGTTACAGCA AAAAAGCCAA AGTCAGCGCC ACCGGTGATG ATGCCCGTGA AGGCCTGATT
GCGGTGGTTT CCGTAAAGGT GCCGGACCCG AAATTCTCCT CCCAGACTAA AGACAAACTG
GTCTCCTCCG AGGTGAAATC GGCGGTTGAA CAGCAGATGA ACGAACTGCT GAGCGAATAC
CTGCTGGAAA ACCCATCTGA CGCGAAAATT GTCGTCGGCA AAATTATCGA CGCCGCGCGT
GCGCGTGAAG CGGCGCGTCG CGCCCGTGAA ATGACCCGTC GTAAAGGCGC GCTCGATTTA
GCCGGTCTGC CGGGCAAACT GGCGGATTGT CAGGAACGCG ACCCGGCGCT GTCCGAACTG
TACCTGGTGG AAGGGGACTC CGCGGGCGGC TCTGCGAAGC AGGGGCGTAA CCGCAAGAAC
CAGGCGATTC TGCCGCTGAA GGGTAAAATC CTCAACGTCG AGAAAGCGCG CTTCGACAAG
ATGCTCTCCT CTCAGGAAGT GGCGACGCTG ATTACCGCGC TGGGCTGCGG TATCGGTCGC
GACGAGTACA ACCCGGACAA GCTGCGCTAT CACAGCATCA TCATCATGAC CGATGCGGAC
GTCGACGGCT CGCACATCCG TACGCTGCTG TTGACCTTCT TCTATCGTCA GATGCCGGAA
ATCGTTGAAC GCGGCCACGT CTACATTGCC CAGCCGCCGC TGTACAAAGT CAAGAAAGGC
AAGCAGGAAC AGTACATTAA AGACGACGAA GCGATGGATC AGTACCAGAT TTCCATCGCG
CTTGACGGTG CGACTCTGCA CGCGAACGCC CATGCGCCGG CGCTATCCGG CGAAGCGTTA
GAAAAACTGG TCTCTGAATA TAACGCCACG CAGAAAATGA TTGGTCGTAT GGAGCGTCGC
TTCCCGAAAG CGCTGCTCAA AGAGCTGGTG TATCAGCCAA CTCTGACCGA AGCCGATCTT
TCTGATGAGC AGACTGTAAC GCGCTGGGTG AATGCGCTGA TTACCGAGCT GAACGAGAAA
GAGCAGCACG GCAGTCAGTG GAAGTTCGAT GTTCATACTA ATACGGAACA GAATCTGTTC
GAGCCGATCG TTCGCGTGCG TACGCATGGC GTGGATACCG ATTATCCGTT GGATCACGAG
TTTGTGACCG GCGCGGAATA TCGTCGTATC TGCACGCTGG GCGAGAAGCT GCGCGGTCTG
ATTGAAGAGG ACGCGTTTAT CGAACGCGGC GAGCGTCGCC AGCCGGTAAC CAGCTTCGAG
CAGGCGCTGG AGTGGCTGGT GAAAGAATCA CGTCGCGGTC TGGCTATCCA GCGTTATAAA
GGTCTGGGTG AAATGAACCC GGATCAGCTG TGGGAAACCA CCATGGACCC GGAAAGCCGC
CGTATGCTGC GCGTGACCGT CAAAGATGCG ATTGCTGCCG ACCAGCTGTT CACCACGCTG
ATGGGTGATG CCGTTGAGCC GCGTCGTGCC TTTATCGAAG AGAACGCCCT GAAAGCGGCG
AACATCGATA TTTAA
|
|---|
| Protein sequence | MSNSYDSSSI KVLKGLDAVR KRPGMYIGDT DDGTGLHHMV FEVVDNAIDE ALAGHCKDIV
VTIHADNSVS VTDDGRGIPT GIHPEEGVSA AEVIMTVLHA GGKFDDNSYK VSGGLHGVGV
SVVNALSQKL ELVIQRDGKI HRQIYEHGVP QAPLAVTGDT DKTGTMVRFW PSHETFTNVT
EFEYEILAKR LRELSFLNSG VSIRLRDKRD GKEDHFHYEG GIKAFVEYLN KNKTPIHPNI
FYFSTEKDGI GVEVALQWND GFQENIYCFT NNIPQRDGGT HLAGFRAAMT RTLNAYMDKE
GYSKKAKVSA TGDDAREGLI AVVSVKVPDP KFSSQTKDKL VSSEVKSAVE QQMNELLSEY
LLENPSDAKI VVGKIIDAAR AREAARRARE MTRRKGALDL AGLPGKLADC QERDPALSEL
YLVEGDSAGG SAKQGRNRKN QAILPLKGKI LNVEKARFDK MLSSQEVATL ITALGCGIGR
DEYNPDKLRY HSIIIMTDAD VDGSHIRTLL LTFFYRQMPE IVERGHVYIA QPPLYKVKKG
KQEQYIKDDE AMDQYQISIA LDGATLHANA HAPALSGEAL EKLVSEYNAT QKMIGRMERR
FPKALLKELV YQPTLTEADL SDEQTVTRWV NALITELNEK EQHGSQWKFD VHTNTEQNLF
EPIVRVRTHG VDTDYPLDHE FVTGAEYRRI CTLGEKLRGL IEEDAFIERG ERRQPVTSFE
QALEWLVKES RRGLAIQRYK GLGEMNPDQL WETTMDPESR RMLRVTVKDA IAADQLFTTL
MGDAVEPRRA FIEENALKAA NIDI
|
|---|
| |