| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4117 |
|---|
| Symbol | |
|---|
| ID | 6485116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 4005939 |
|---|
| End bp | 4007201 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642739373 |
|---|
| Product | putative permease |
|---|
| Protein accession | YP_002043082 |
|---|
| Protein GI | 194445607 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.477286 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 87 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATGG CCCTTACCGC CCCCCCAACC AGGAAAAGAT TTTTAATCGT TGCCTGTCTG
TTTATTGGAA TATTTATTGC TTATCTCGAT CGCGTTAATG TTTCGGTATT AGCCGCGAAT
GAACCCTTCT TAGCCTATAT GGGTATTGAA GGTATGCCAT TGCAAATCGG CATGATGATG
ACCGTCTTTC TGGCCGCTTA TGGTATCGCT AACGTTGTAT TATCACCGCT TGGTGATTAT
CTCGGCCCCA GAAAAGCAAT GATGCTTTGT ATTCTGATCT GGACTATCGC TTTAATGATT
GGCGGAGTCG CTACATCATT CGCTCTAATT ATTATTTGCC GTATATTACT GGGCATCGGA
GAGGGATTTT ATTATCCACT GCAAAGCGTA TTTATTAAAA ACTGGTTCCC GAAGCAGGAG
CGCGGCAGAG CAAACGCGGC GTGGATCGTC GGCCAGTCGG TGGCACCCGC CATTGCGATG
CCTTTTTTCA CCTGGTGGAT AGGCACCCAC GGCTGGCGTT CCAACTTTTT CTTATGCGCC
GCTCTCGGGT TAATCCCTCT TTGGCTACTT TGGCGATATG TTGCTGATAA ACCAGAACAA
CATAAAAGTA TCAGCGAACA AGAACTGGCT TATATCAAAG CTGGACAGGA AACGGAAAGC
GCAGGCAACA GCGAAAGTTT TATGTTGCGG GTAAAACCGG TGATCACCAA CTACTGTTAC
TGGCTGCTGG TACTGTGGTA TCTGTGTCTG CAATGCCTGT ACTGGGGGAT GATTACCTGG
CTGCCGACCT ATCTAAAATC AGCCAGAGGA TTCAGTTGGG CGGAAATGGG CTGGCTGGCG
TCGCTTCCCT TTGTCCTGTC GATATTTGCC AAAGCGGCCG CAGGCGTCTT CGTCGATAAA
ATAGGACGCA GCGCCCCCAT ATTAATGGTA TTAATGTTTT TCGCTGGCGT CAGTATCTAT
TTCGGCACCA TAACCGAACA TAAATATATG TCGGCGGTAC TCCTCTCCTT TGCTGTTGCT
TTCTGTACGA TGGGTACGCC CGTTGCCTGG ACGTTATTAC AGGGAATGAT ACCCGGAAAA
TCTATTTCTG CCGCCAGCGG CGTAATGAAC GGCGTCGCCA ATGGACTCTC TTCATTATCC
CCCGTATTTA TCGGCTTATT TATTTCTATC ACTGGAACTT ATACCGGCGG CTTACTATGC
CTGGTTTTTA TCAGCGCTAT CGCCGTGGTA TCGGCATTAA TCTTAACGAT TAAAAAATAT
TAA
|
|---|
| Protein sequence | MSMALTAPPT RKRFLIVACL FIGIFIAYLD RVNVSVLAAN EPFLAYMGIE GMPLQIGMMM
TVFLAAYGIA NVVLSPLGDY LGPRKAMMLC ILIWTIALMI GGVATSFALI IICRILLGIG
EGFYYPLQSV FIKNWFPKQE RGRANAAWIV GQSVAPAIAM PFFTWWIGTH GWRSNFFLCA
ALGLIPLWLL WRYVADKPEQ HKSISEQELA YIKAGQETES AGNSESFMLR VKPVITNYCY
WLLVLWYLCL QCLYWGMITW LPTYLKSARG FSWAEMGWLA SLPFVLSIFA KAAAGVFVDK
IGRSAPILMV LMFFAGVSIY FGTITEHKYM SAVLLSFAVA FCTMGTPVAW TLLQGMIPGK
SISAASGVMN GVANGLSSLS PVFIGLFISI TGTYTGGLLC LVFISAIAVV SALILTIKKY
|
|---|
| |