Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4114 |
Symbol | |
ID | 6482719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4002964 |
End bp | 4003842 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642739370 |
Product | 2-dehydro-3-deoxygalactonokinase |
Protein accession | YP_002043079 |
Protein GI | 194442748 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3734] 2-keto-3-deoxy-galactonokinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 85 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCTC GCTACATCGC AATTGACTGG GGATCGACCA ATCTGCGCGC CTGGCTTTAC CAGGGCGACA AATGCCTGGA GAGCAGGCAA TCAGAAGCAG GCGTTACACG CCTGAACGGT AAATCTCCTG ACGCGGTGTT AGCAGAAGTC ACAACACACT GGCGCGACAG CGCCACCCCC GTGGTAATGG CGGGCATGAT CGGCAGTAAC GTAGGCTGGC AAAATGCGCC TTATCTGCCG GTTCCCGCCC TGTTCTCCGC TATTGGCGAA CAGTTAACCG CCGTTGGCGA CAACATCTGG ATCATCCCCG GATTGTGTGT CTCACGCGAG GATAACCACA ACGTGATGCG CGGCGAAGAG ACGCAACTGC TTGGCGCCCG CGAACTTTCT CCTTCTTCTG TCTATGTCAT GCCCGGCACG CATTGCAAAT GGGTACAGAC TGATATGCAA CAAATTCATG ATTTTCGTAC TGTGATGACA GGCGAACTCC ATCACTTGTT GCTGCGTCAC TCGCTGGTCG GGGCTGGTTT GCCGGAACAG GAAGTTTCTG GCGACGCCTA TGCCGCGGGG CTGGAGCGCG GTCTTAATTC TCCTGCCGTC CTGCCTTCTC TTTTTGAGGT TCGCGCCTCG CACGTGTTGG GACATCTTGC GCGTGAGCAG GTCAGCGACT TCCTCTCCGG CCTGTTGATT GGCGCGGAAG TCGCCAGCAT GAGCGAATCC TTCGCGGCGC AACAGGCTAT CACTCTCGTC GCTGGACCCG CGCTGATCTC ACGTTACCAA CAGGCGTTTC GTGCTATTGG GCGTGATGTT TCAACCGTGG ATGGCGATAT GGCATTTCAG GCTGGAATAA GGAGCATCGC TCATGCAGTG GCAAACTAA
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Protein sequence | MTARYIAIDW GSTNLRAWLY QGDKCLESRQ SEAGVTRLNG KSPDAVLAEV TTHWRDSATP VVMAGMIGSN VGWQNAPYLP VPALFSAIGE QLTAVGDNIW IIPGLCVSRE DNHNVMRGEE TQLLGARELS PSSVYVMPGT HCKWVQTDMQ QIHDFRTVMT GELHHLLLRH SLVGAGLPEQ EVSGDAYAAG LERGLNSPAV LPSLFEVRAS HVLGHLAREQ VSDFLSGLLI GAEVASMSES FAAQQAITLV AGPALISRYQ QAFRAIGRDV STVDGDMAFQ AGIRSIAHAV AN
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