Gene SNSL254_A4086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4086 
Symbol 
ID6486653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp3977320 
End bp3977667 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content54% 
IMG OID642739343 
Productinner membrane protein YidH 
Protein accessionYP_002043052 
Protein GI194442581 
COG category[S] Function unknown 
COG ID[COG2149] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTT CCCGCCTCGG AGAAGCGCCG GATTATCGCT TCTCACTGGC AAATGAGCGC 
ACCTTTCTGG CGTGGATTCG CACCTCGCTG GGATTTCTGG CGGCAGGCGT CGGTCTTGAT 
CAGCTCGCCC CGGATTTTGC CACGCCGGTG ATCCGTGAAC TGCTGGCGCT ATTGTTGTGT 
CTGTTTGCGG GCGGCCTGGC GATTTATGGC TATCTACGCT GGTTACGTAA TGAAAAAGCG 
ATGCGCCTGA AAGAGGATTT GCCCTATACC CATAGCCTGT TGATCATCAG CGTTATTTTG 
ATGATTGTCG CGGTGATAGT GATGGGGCTG GTACTGTATG CCGGATAG
 
Protein sequence
MKISRLGEAP DYRFSLANER TFLAWIRTSL GFLAAGVGLD QLAPDFATPV IRELLALLLC 
LFAGGLAIYG YLRWLRNEKA MRLKEDLPYT HSLLIISVIL MIVAVIVMGL VLYAG