Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4077 |
Symbol | ilvB |
ID | 6486471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3966501 |
End bp | 3968189 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642739334 |
Product | acetolactate synthase catalytic subunit |
Protein accession | YP_002043043 |
Protein GI | 194442329 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGTT CGGGCACAAC ATCTACACCT CAGCGCTTTA CGGGCGCGGA ATTTATTGTT CATTTTCTGG AGCGCCAGGG GATTCGTATC GTCACCGGCA TTCCCGGCGG TTCGATCCTC CCCGTTTACG ACGCGTTAAG CCAAAGTACG CAAATCCGTC ATATTCTGGC GCGCCACGAA CAAGGCGCGG GGTTTATTGC GCAGGGGATG GCGCGAACGG AGGGTAAACC TGCTGTTTGT ATGGCCTGTA GCGGGCCGGG CGCGACCAAT CTGGTCACGG CCATTGCCGA TGCGCGCCTG GATTCCATTC CGTTAATCTG CATTACCGGG CAAGTTCCGG CGTCCATGAT CGGTACTGAC GCGTTTCAGG AAGTGGATAC CTACGGTATC TCTATCCCCA TCACCAAGCA CAACTATCTG GTCAGAAATA TCAACGAGCT GCCTCAGGTG ATGAGCGATG CTTTTCGTCT GGCGCAGTCG GGGCGTCCCG GCCCGGTGTG GATAGACGTT CCTAAAGATG TGCAGACGGC GACAATTGAG CTGGATGCGT TGCCGTCGCC GGCGGAAAAA TCACCCCCGC CGGAGTTTAG CGCGGAGAGT ATCCGCGAGG CCGCCGCAAT GATTAACGCG GCGAAGCGTC CGGTGCTGTA TCTGGGCGGC GGCGTGATCA ATGCGCCGAC ACGCGTGCGC GAACTGGCGG AAAAAGCGCA ACTGCCGACG ACAATGACCT TAATGGCGCT GGGAATGCTG CCTAAGGCGC ATCCGCTGTC GTTAGGAATG CTGGGGATGC ACGGCGCGCG CAGTACCAAT TTTATTCTGC AAGAGGCCGA TTTACTGATT GTCCTGGGCG CGCGTTTTGA TGACCGGGCG ATTGGCAAAA CGGAGCAGTT TTGTCCGAAC GCCAAAATCA TCCATGTGGA TATCGATCGC GCCGAGTTAG GCAAAATTAA GCAGCCGCAT GTGGCTATTC AGGCGGATGT CGATGATGTA CTGGCACAGT TAATTCCCCA TATCGAGGCA CAGCCGCGGG AAGCATGGCA TCAGTTGGTG GCGGACTTGC AGCAAGAATT CCCTTGCAGT ATTCCCCAGG AAAATAACCC GCTTAGTCAC TATGGGCTGA TTAACGCGGT CGCCGCCTGT GTGGACGACA ACGCGATTAT TACCACTGAC GTAGGTCAGC ATCAGATGTG GACCGCGCAG GCTTATCCGC TCAACCGTCC GCGTCAGTGG CTGACTTCCG GCGGGCTGGG CACCATGGGG TTTGGTCTGC CCGCGGCGAT TGGCGCGGCG CTGGCGAATC CGGGCAACAA GGTGCTGTGT TTTTCCGGCG ACGGTAGTTT GATGATGAAT ATTCAGGAGA TGGCTACCGC CAGTGAAAAC CAGTTGGATG TGAAAATTAT CCTGATGAAT AACGACGCGC TGGGACTGGT ACATCAGCAA CAGAGTCTGT TCTATAAACA GGGCGTTTTT GCGGCAACCT ATCCGGGGAG CATCAACTTT ATGCAGATTG CCGCCGGGTT TGGTCTGGAT ACCTGTGATT TGAATAACGA AGCCGATCCG CAGGCGGCGT TGCAGGCTAT CATTCGTCGT CCTGGACCGG CGTTGATCCA TGTGCGCATT GATGCAGAAG AAAAAGTGTA TCCGATGGTG CCGCCGGGCG CGGCAAATAC AGAGATGGTG GGGGAATAA
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Protein sequence | MASSGTTSTP QRFTGAEFIV HFLERQGIRI VTGIPGGSIL PVYDALSQST QIRHILARHE QGAGFIAQGM ARTEGKPAVC MACSGPGATN LVTAIADARL DSIPLICITG QVPASMIGTD AFQEVDTYGI SIPITKHNYL VRNINELPQV MSDAFRLAQS GRPGPVWIDV PKDVQTATIE LDALPSPAEK SPPPEFSAES IREAAAMINA AKRPVLYLGG GVINAPTRVR ELAEKAQLPT TMTLMALGML PKAHPLSLGM LGMHGARSTN FILQEADLLI VLGARFDDRA IGKTEQFCPN AKIIHVDIDR AELGKIKQPH VAIQADVDDV LAQLIPHIEA QPREAWHQLV ADLQQEFPCS IPQENNPLSH YGLINAVAAC VDDNAIITTD VGQHQMWTAQ AYPLNRPRQW LTSGGLGTMG FGLPAAIGAA LANPGNKVLC FSGDGSLMMN IQEMATASEN QLDVKIILMN NDALGLVHQQ QSLFYKQGVF AATYPGSINF MQIAAGFGLD TCDLNNEADP QAALQAIIRR PGPALIHVRI DAEEKVYPMV PPGAANTEMV GE
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