Gene SNSL254_A4055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4055 
Symbol 
ID6485832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3945303 
End bp3946685 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content54% 
IMG OID642739313 
Productbeta-glucosidase 
Protein accessionYP_002043022 
Protein GI194446382 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0966548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.0647863 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATACC GTTTTCCCGA TAACTTCTGG TGGGGCAGCG CCTGCTCAGC GTTGCAAACC 
GAAGGGGATA GTCTGAATGG CGGTAAAAGC CAGACCACGT GGGATGTGTG GTTCGAGCGC
CAGCCTGATC GTTTTCACCA GGGCGTCGGT CCAGCGGAAA CCTCAACGTT CTATCGCCAC
TGGAAGCAAG ACATCGCGCT ACTGAAACAG TTAAAACATA ACAGTTTTCG CACCTCGCTA
AGCTGGGCGC GGCTCATTCC AGACGGCGTA GGCGAGGTGA ATCCACAAGC GGTGAGCTTC
TACAATCACG TCATCGACGA GCTACTGGCG CAGGGCATCA CGCCGTTTAT TACGCTGTTC
CATTTTGATA TGCCGATGGT CATGCAGGAG AAAGGCGGCT GGGAAAATCG CGACGTCGTA
GAGGCGTTTG GTCGGTACGC GCAAACGTGT TTTACCTTGT TTGGCGACCG CGTGAAGCAC
TGGTTTACCT TTAACGAGCC GATTGTGCCG GTGGAGGGCG GCTATTTGTA CGACTTCCAC
TATCCCAATG TGGTGGATTT TAAACGTGCG GCCACCGTGG CGTACCATAC CGTGCTGGCG
CACTCGACCG CCGTGCGCGC CTGGCGCGCC GGGCGCTACG ACGGTGAAAT CGGCGTAGTG
CTGAATCTGA CGCCGTCCTA CCCACGCTCG CAGCATCCCG CCGATGTGCA AGCCGCGCAT
CATGCGGATC TGTTATTCAA CCGCAGTTTT CTTGACCCGG TATTAAAGGG AGAATACCCG
GCGGACTTGG TGGCGCTGCT GAAAACCTAT GACCAGCTGC CTGCCTGTCA GCCAGGCGAC
CGTCAGCTTA TTGCCGACGG CAAAATCGAT TTACTGGGGA TTAACTATTA TCAGCCGCGC
CGCGTGAAAT GCCGTGATAC GGCGGTGAAT CCGCAAGCGC CGTTTATGCC GGAATGGTTA
TTTGACTATT ACGACATGCC GGGGCGCAAG ATGAACCCTT ACCGCGGCTG GGAAATTTAC
GCGCCAGGAA TTTACGACAT CATCACCAAC CTGCGGGATA ATTACGGCAA TCCGCGCTGT
TTTATCTCCG AAAACGGGAT GGGCGTTGAG AACGAGCAGC GTTTTGTGCA AGCGGGACAG
ATTCACGATG ATTACCGGAT TGACTTTATC TCTGAGCATC TTAAATGGCT GCATAAAGGC
ATTAGCGAGG GCTGTCACTG TCTTGGCTAC CACATGTGGA CCTTTATCGA TAACTGGTCA
TGGCTGAACG GCTATAAAAA TCGCTATGGT TTTGTACAAC TGGATTTAGC CACCCAAACG
CGCACGGTGA AAAAAAGCGG AGAATGGTTT GCCGCCACCG CAGAGCATAA CGGTTTTGAT
TAA
 
Protein sequence
MRYRFPDNFW WGSACSALQT EGDSLNGGKS QTTWDVWFER QPDRFHQGVG PAETSTFYRH 
WKQDIALLKQ LKHNSFRTSL SWARLIPDGV GEVNPQAVSF YNHVIDELLA QGITPFITLF
HFDMPMVMQE KGGWENRDVV EAFGRYAQTC FTLFGDRVKH WFTFNEPIVP VEGGYLYDFH
YPNVVDFKRA ATVAYHTVLA HSTAVRAWRA GRYDGEIGVV LNLTPSYPRS QHPADVQAAH
HADLLFNRSF LDPVLKGEYP ADLVALLKTY DQLPACQPGD RQLIADGKID LLGINYYQPR
RVKCRDTAVN PQAPFMPEWL FDYYDMPGRK MNPYRGWEIY APGIYDIITN LRDNYGNPRC
FISENGMGVE NEQRFVQAGQ IHDDYRIDFI SEHLKWLHKG ISEGCHCLGY HMWTFIDNWS
WLNGYKNRYG FVQLDLATQT RTVKKSGEWF AATAEHNGFD