Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4023 |
Symbol | trmH |
ID | 6485844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3909336 |
End bp | 3910025 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642739282 |
Product | tRNA guanosine-2'-O-methyltransferase |
Protein accession | YP_002042992 |
Protein GI | 194444680 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.608794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCAA AACGTTATGC GCGTATATGC GAAATGCTCG CCAGGCGTCA GCCTGATCTC ACGGTCTGCA TGGAGCAAGT CCACAAACCT CATAACGTTT CTGCAATCAT TCGTACCGCA GATGCCGTTG GCGTCCATGA AGTCCATGCT ATCTGGCCAG GTAGCCGGAT GCGCACCATG GCTTCCGCGG CGGCGGGCAG CAACAGTTGG GTACAGGTGA AAACTCACCG TACCATTGGC GATGCGGTAG CCCATTTGAA AGGACGGGGA ATGCAGATTC TGGCAACCCA TCTTTCTGAT AAGGCCGTAG ACTTTCGCGA GATTGATTAC ACGCGCCCGA CCTGTATTCT GATGGGTCAG GAGAAAACCG GTATTACGCA GGAAGCATTA GACCTGGCGG ATCGGGATAT CATCATTCCG ATGATCGGTA TGGTACAGTC GCTGAACGTT TCCGTCGCCT CCGCGCTCAT TCTTTATGAA GCCCAGCGCC AGCGGCAGAA CGCGGGCATG TATCTGCGTG AAAATAGCAT GTTGCCGGAA GATGAACAGC AGCGCCTGCT GTTTGAGGGT GGTTATCCGG TGCTGGCGAA AGTCGCTAAA CGTAAAGGTC TGCCTTATCC TCGCGTCAAT CAGCAGGGCG AAATAGACGC CGATGCTGAC TGGTGGGCGA CGATGCAGGC GGCAGGGTAA
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Protein sequence | MNPKRYARIC EMLARRQPDL TVCMEQVHKP HNVSAIIRTA DAVGVHEVHA IWPGSRMRTM ASAAAGSNSW VQVKTHRTIG DAVAHLKGRG MQILATHLSD KAVDFREIDY TRPTCILMGQ EKTGITQEAL DLADRDIIIP MIGMVQSLNV SVASALILYE AQRQRQNAGM YLRENSMLPE DEQQRLLFEG GYPVLAKVAK RKGLPYPRVN QQGEIDADAD WWATMQAAG
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