| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4013 |
|---|
| Symbol | pyrE |
|---|
| ID | 6486237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 3899110 |
|---|
| End bp | 3899751 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642739272 |
|---|
| Product | orotate phosphoribosyltransferase |
|---|
| Protein accession | YP_002042982 |
|---|
| Protein GI | 194444077 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0461] Orotate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.62397 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 85 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGT ATCAGCGCCA GTTTATTGAG TTTGCGCTTA ACAAGCAGGT ACTAAAGTTT
GGCGAGTTTA CGCTGAAATC CGGGCGCAAA AGCCCCTATT TCTTCAACGC CGGGCTGTTT
AATACCGGGC GCGACCTGGC GTTGTTAGGC CGTTTTTATG CCGAAGCGCT GGTGGATTCC
GGTATTGAAT TTGATCTGCT GTTTGGCCCC GCGTACAAAG GTATTCCGAT CGCGACGACG
ACGGCGGTTG CGCTGGCGGA ACATCACGAT AAAGACCTGC CGTACTGCTT TAACCGCAAA
GAGGCAAAAG ATCATGGCGA AGGCGGGAGT CTGGTGGGCA GCGCGCTACA GGGCCGCGTG
ATGCTGGTGG ATGACGTGAT TACCGCAGGT ACGGCGATTC GTGAGTCGAT GGAGATTATT
CAGGCGCACG GGGCTACGCT GGCTGGCGTA CTGATTTCGC TGGATCGTCA GGAACGTGGC
CGCGGCGAGA TTTCCGCGAT TCAGGAAGTG GAGCGCGACT ATGGTTGTAA GGTTATCTCC
ATCATTACGC TGAAAGACCT GATTGCCTAT CTGGAGGAAA AACCTGATAT GGCTGAGCAT
CTGGCGGCTG TGCGAGCATA CCGGGAAGAA TTTGGCGTGT AA
|
|---|
| Protein sequence | MKPYQRQFIE FALNKQVLKF GEFTLKSGRK SPYFFNAGLF NTGRDLALLG RFYAEALVDS
GIEFDLLFGP AYKGIPIATT TAVALAEHHD KDLPYCFNRK EAKDHGEGGS LVGSALQGRV
MLVDDVITAG TAIRESMEII QAHGATLAGV LISLDRQERG RGEISAIQEV ERDYGCKVIS
IITLKDLIAY LEEKPDMAEH LAAVRAYREE FGV
|
|---|
| |