Gene SNSL254_A4012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4012 
SymbolslmA 
ID6484224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp3898436 
End bp3899032 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content52% 
IMG OID642739271 
Productnucleoid occlusion protein 
Protein accessionYP_002042981 
Protein GI194446172 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.554445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAA AACAAACTGC GAAAAGGAAT CGTCGCGAAG AAATACTTCA GTCACTGGCG 
CTGATGCTTG AATCCAGCGA TGGAAGCCAA CGCATCACGA CGGCAAAACT GGCGGCCTCG 
GTCGGCGTTT CCGAAGCGGC GCTATACCGC CATTTTCCCA GCAAGACCCG CATGTTCGAT 
AGCCTGATTG AGTTTATCGA AGATAGTCTG ATTACCCGTA TCAATCTGAT TTTAAAAGAT 
GAAAAAAACA CCAGCACGCG TTTGCGCCTG ATTGTGTTGC TGATTCTGGG TTTTGGCGAA 
CGCAACCCTG GCCTGACGCG CATTCTTACC GGGCACGCGC TGATGTTTGA ACAGGATCGC 
CTGCAGGGGC GCATTAATCA GCTTTTTGAA CGCATCGAAG CGCAGCTCCG CCAGGTGCTA 
CGAGAAAAAA GAATGCGTGA AGGCGAAGGC TACACGACGG ATGAAAATCT GCTGGCAAGC 
CAGCTGTTAG CCTTCTGTGA AGGTATGCTT TCACGGTTTG TGCGTAGCGA ATTTAAATAC 
CGCCCAACGG ACGATTTCGA CGCCCGCTGG CCGCTCATTG CCGCTCAGCT ACAGTAA
 
Protein sequence
MAEKQTAKRN RREEILQSLA LMLESSDGSQ RITTAKLAAS VGVSEAALYR HFPSKTRMFD 
SLIEFIEDSL ITRINLILKD EKNTSTRLRL IVLLILGFGE RNPGLTRILT GHALMFEQDR 
LQGRINQLFE RIEAQLRQVL REKRMREGEG YTTDENLLAS QLLAFCEGML SRFVRSEFKY 
RPTDDFDARW PLIAAQLQ