| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4003 |
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| Symbol | |
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| ID | 6486825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3891011 |
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| End bp | 3892081 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642739263 |
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| Product | lipopolysaccharide core biosynthesis protein |
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| Protein accession | YP_002042973 |
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| Protein GI | 194443756 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02201] lipopolysaccharide heptosyltransferase III, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.043966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAAAGC CATTTCGAAG AATTCTGATT ATAAAAATGC GTTTTCATGG AGACATGTTA
CTTACCACTC CTGTCATCAG CACGCTGAAG CAGAATTATC CCGATGCAAA AATCGATGTG
CTTCTTTACC AGAACACCAT ACCGATATTG TCGGAAAATC CGGAGATTAA TGCACTCTAC
GGCATCAGTA ACAAAGGCGC AGGAACAAAA GAGAAGATCA AAAACGCGCT ATCGCTAATC
AAAAAATTGC GTGCTAACTC GTATGATCTG GTCGTCAATC TCACCGATCA GTGGAGCGTG
GCGCTTATTG TGCGTTTTTT AAACGCAAAA ATAAAAATCT CGCAGGATTT CGGTAATCGT
CAGTCTGCTT TATGGAAAAA AAGCTTTACG CATTTAGTAC CTTATGCGGG AGAACATGCT
GTTGATCGCA CATTATCCGC GCTAAAGCCG TTAGCGCTAA AACAGTATGT CACGGAAACC
ACCATGAGCT ATCGCCCGGA ACATTGGGAA AACATGCGAC AACAGCTCAA ACAACTTGGT
GTGACCCGAC AGTATGTTGT TATTCAGCCT ACGGCACGGC AGCTATTTAA GTGCTGGGAT
AATGATAAAT TCTCGCAGGT TATTGATGCC GTGCAGCGCC GCGGTTATCA AGTTGTACTG
ACGTCAGGCC CGGCCGCAGA CGAGATGGCC TGCGTGGATG CTATTGCACG CGGCTGTGAA
ACAAAACCGG TTACTGGTCT GGCGGGTAAA ACTCGCTTTC CTGAATTGGG CGCGTTGATT
GACCATGCGG ATCTCTTTAT CGGCGTTGAT TCGGCCCCTG GTCATATTGC CGCAGCAGTC
AAAACGCCGG TCATTTGCCT TTTCGGCGCG ACGGATCATG TGTTCTGGCG TCCCTGGACC
GACGACATCA TTCAGTTTTG GGCAGGAAAT TATCAGCCGA TGCCTGAACG GCATGAGCTT
GATCGTAATA AAAAATACCT TTCCGTGATT CCGGCTGAAG ATGTTATCGC CGCGACGGAA
AAAATGCTGC CGCATGAGGC ACGCGCCATA GATTTGGACA GCCTGCTATG A
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| Protein sequence | MEKPFRRILI IKMRFHGDML LTTPVISTLK QNYPDAKIDV LLYQNTIPIL SENPEINALY
GISNKGAGTK EKIKNALSLI KKLRANSYDL VVNLTDQWSV ALIVRFLNAK IKISQDFGNR
QSALWKKSFT HLVPYAGEHA VDRTLSALKP LALKQYVTET TMSYRPEHWE NMRQQLKQLG
VTRQYVVIQP TARQLFKCWD NDKFSQVIDA VQRRGYQVVL TSGPAADEMA CVDAIARGCE
TKPVTGLAGK TRFPELGALI DHADLFIGVD SAPGHIAAAV KTPVICLFGA TDHVFWRPWT
DDIIQFWAGN YQPMPERHEL DRNKKYLSVI PAEDVIAATE KMLPHEARAI DLDSLL
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